IMMSA

International Microbiome & Multi'Omics Standards Alliance (IMMSA)

#microbiome #microbialstandards #metagenomics #omics

[IMMSA @IMMSAStandards]

Excited for our very own IMMSA Bioinformatics group leader- Ben Callahan!

[ASM @ASMicrobiology]

Join us at #ASMicrobe on June 17 for "Connecting Data, People, and Ideas with the National Microbiome Data Collaborative"! Meet Benjamin Callahan, the 2023 ASM Microbiome Prize Awardee, and @microbiomedata Ambassadors to explore their data stewardship. https://t.co/WY0EfVd3hV

[Scott A. Jackson @thescottjackson]

The @NIST microbial team is out in full force at #ASMicrobe.

[ASM @ASMicrobiology]

What are you most looking forward to about attending #ASMicrobe? Comment below!

[Laura Hug @LAHug_]

Are you a data creator/user in #metagenomics or other #omics? We’re working on standards for fair data reuse and would like your feedback. We welcome contributions by scientists from all career stages. 5-min survey here: https://t.co/A7DV7QWIPU Please RT!

[National Microbiome Data Collaborative @MicrobiomeData]

Applications for the NMDC Ambassador program are now OPEN! Join the NMDC and help other researchers learn about #microbiome data stewardship. Apply now to be a 2023 NMDC Ambassador! https://t.co/oaf2WXW43r

[IMMSA @IMMSAStandards]

@bejcal @JTNearing No need to re-sign up!

[IMMSA @IMMSAStandards]

Calling all students and microbiome professionals! Join the IMMSA Bioinformatics Working Group to address "How do we define how accurate a microbiome profile is?" https://t.co/9rRZnRE72x. Meeting will be on zoom Thursday Nov 10, 2022 at Noon eastern time!

[IMMSA @IMMSAStandards]

@MicrobiomeData
@All_Microbiomes
@seq_code
@jgi
@ASM_NGS
@genomestandards
@NCBI
@emblebi @bejcal @JasonKralj_NIST

[NIST Events and Conferences @NIST_Events]

Thank you everyone who participated in our 1st annual NIST-Hosted Workshop on Standards for Microbiome and Multi'Omics Measurements hybrid event held at NIST Boulder! https://t.co/wyD7LfUyhC #NISTMicrobiome

[IMMSA @IMMSAStandards]

Great week with great scientists! Excited about the future of #microbiome standards and our #workinggroups #NISTMicrobiome

[Leigh A. Frame 🍎🥕🍋🥦🍇 @PhD_Leigh]

The #NISTMicrobiome keynote from @gilbertjacka: Large scale comparisons and #microbiome standards.

[IMMSA @IMMSAStandards]

A great meeting thus far to improve #microbiome #standards and #measurements! #NISTMicrobiome @NIST

[IMMSA @IMMSAStandards]

Nist is conducting an interlab study to examine bias in #dnaextraction and #sequencing. Recipients will receive a stool sample with internal standards! DM if you want to be included! #NISTMicrobiome

[Leigh A. Frame 🍎🥕🍋🥦🍇 @PhD_Leigh]

We've recently rediscovered the value of #WasteWater surveillance. @ishi_keenum, @NIST, presents on the driving factors in processing for monitoring via #metagenomics. #NISTMicrobiome

[Leigh A. Frame 🍎🥕🍋🥦🍇 @PhD_Leigh]

Agreed! Internal standards would help. Sounds like a job for #NISTMicrobiome. @NIST

[Leigh A. Frame 🍎🥕🍋🥦🍇 @PhD_Leigh]

We know our #microbiome measurements are biased, but generally prescribe to that being "OK" because we standardize our approach within a study. Well, maybe it's not okay. 😳 See example below where one taxa is much easier to lyse than another. 😱 #NISTMicrobiome

[Leigh A. Frame 🍎🥕🍋🥦🍇 @PhD_Leigh]

Now onto #bacterial motility in evolutionary mechanisms fit acquired antimicrobial resistance from Lisa Stabryla. #NISTMicrobiome

[Leigh A. Frame 🍎🥕🍋🥦🍇 @PhD_Leigh]

How do we improve standardization in Stable Isotope Probing #metagenomics. #NISTMicrobiome

[Leigh A. Frame 🍎🥕🍋🥦🍇 @PhD_Leigh]

#NISTMicrobiome's Jason Kralj on #Metagenomic NGS/MGS performance metrics with an organism-centric approach. (Recording will be available on the @NIST website.)

[Leigh A. Frame 🍎🥕🍋🥦🍇 @PhD_Leigh]

Next @IMMSAStandards Workshop, a case study of rapid #microbiome #multiomics analysis in #IBD from Dana Walsh, @CosmosID. #NISTMicrobiome