Jannie Munk Kristensen

Environmental microbiologist and microscopy enthusiast

[Mads Albertsen @MadsAlbertsen85]

In a great collaboration with @CEMAarhus, we have used high-throughput @nanopore metagenomics to recover the first closed genomes of the enigmatic "Cable bacteria"! A thread, 1/10 https://t.co/Nl8zED7w1Q

[Nature Portfolio @NaturePortfolio]

A @NatureBiotech paper presents a method called EEL FISH that profiles spatial transcriptomes in single cells in large, complex tissue samples. https://t.co/u6KhOhptko

[Dr. Sondra Turjeman @SondraTurjeman]

My first FISH (almost) all by myself. Thanks to Jannie, Kathi, and the whole @DOME_Vienna FISH course team!

[Michael Wagner @MichiWagner4]

Interested in functional analyses of microbes in complex samples? Check out our newest pre-print from the collaboration with the fantastic Ji-Xin Cheng lab. Here we use Mid-Infrared Photothermal - FISH to detect 13C-incorporation in FISH-identified cells

https://t.co/rjDOFHFkES

[Shannan Foylan @shannan_foylan]

Our MesoTIRF pre-print is out! https://t.co/59DJaGZCV0

We demonstrate TIRF imaging across the 4.4 mm x 3.0 mm field of view of the Mesolens, allowing for TIRF’s characteristic contrast and axial resolution improvement across > 700 cells simultaneously!

[Michael Wagner @MichiWagner4]

My group @DOME_Vienna will be looking soon for a #PostDoc in Stimulated Raman Spectroscopy (SRS)- imaging of microbiomes using our new SRS-fluorescence microscopy instrument. If you are interested in chemical imaging, physiology, or antibiotic resistance DM or Email me #ISME18

[Mark van Loosdrecht  @MarkvLoosdrecht]

Interested in Microbial Ecology of wastewater treatment processes? @PerHNielsen and we are looking for a #Postdoc who is interested to further develop this field, bridging research between our laboratories in @TUDelft and @aalborguni
Send a DM or contact @PerHNielsen at #isme18

[Kasia Piwosz @KasiaPiwosz]

Optimized FISH protocol for protist in activated sludge by Jannie Munk Kristensen (poster 407) #ISME18

[Anouk Willemsen (@[email protected]) @willemsen_anouk]

Happy to share that my #ERCStG #CHIMERA has been selected for funding! In this @ERC_Research project I will study #GiantViruses, their #evolution, their ecological interactions, and how these have shaped their #genomes.

Big thanks to everyone that helped me get here!

[Michael Wagner @MichiWagner4]

Today in @PNASNews: Superfast functional analyses of #microbiome members via single cell isotope probing with SRS-FISH #Raman @FatimaCPereira

Special thanks for a fantastic collaboration with Ji-Xin Cheng's group in Boston.

https://t.co/OdKVsDsU5D

[Jannie Munk Kristensen @Jance89]

@OpenFlexure Yes, i built my @OpenFlexure in Denmark and now i use it in Austria

[Jill Banfield @BanfieldJill]

1. Major unlock of CRISPR potential empowered by metagenomics #NewMetaCRISPR. I’ve been hoping to see this happen for years: a way to edit the genomes of microorganisms within communities

[Adrien Leger @AdrienLeger2]

Another great talk from Mantas Sereika from Aalborg University showing near-perfect @nanopore only bacterial genome assemblies, largely due to longer homopolymer resolution.

At #nanoporeconf in the mini-theatre

[Mads Albertsen @MadsAlbertsen85]

Our new preprint shows our efforts to evaluate state-of-the-art long-read sequencing for genome-centric metagenomics. Started years ago by @kirk3gaard and continued by Mantas. tldr; HQ-MAGs using @nanopore -only is really close! @PacBio is just nice! https://t.co/gNxAUFgkkw

[Julia Vierheilig @4heilig]

Great presentation from @Jance89 @DOME_Vienna on novel eukaryote-bacteria interactions in activated sludge this morning @MEWE2021. Looking forward to seeing more results from this exciting project in the near future. #mewe2021

[ASM @ASMicrobiology]

This year’s Agar Art contest is now OPEN! Put your artist's hat on and create your masterpiece for a chance to win up to $100-worth of prizes. Deadline is October 22. For more details, visit https://t.co/PHRKE9s62l. #agarart #bioart

[Luis Javier Galindo @Luisjagago]

We introduce Sanchytriomycota, a new fungal phylum with some unique characteristics:

Flagellated zoospores that do not swim ✅

https://t.co/PTgsDvARRU @SpringerNature @NatureComms

But why?👇

[Alex Jaffe @alexander_jaffe]

happy to share this short observation paper on microbial communities associated with aster-like nanoparticles (ALNs) in collaboration with co-first author @MaximeFuster + @ChenLinxing @MScholmerich and others @LMGE_UCA! as always, comments and feedback very welcome.