LINCS Program

The NIH Common Fund-supported Library of Integrated Network-Based Cellular Signatures (LINCS) Program #LINCSDATA @BD2KLINCSDCIC

[Ma'ayan Lab @MaayanLab]

Join us on Thur. July 24 @ 2 PM ET for a virtual seminar about ChEA-KG, a newly developed @MaayanLab web-based app that enables users to analyze their gene sets in context of a human gene regulatory network (1559 transcription factors). Please register at https://t.co/oZ7SQR8vjo

[Ma'ayan Lab @MaayanLab]

Join us on Thursday, February 27 at 2:00 PM ET for a virtual seminar featuring ARCHS4, a web resource that streamlines access to over two million uniformly aligned RNA-seq samples from GEO. Please register in advance: https://t.co/zFA2YA2Fy3

[Ma'ayan Lab @MaayanLab]

Join us on Thursday, January 23 at 2:00 PM ET for a virtual seminar featuring GeneSetCart, a web application for multi-omics AI-driven gene set analysis. Please register in advance for this virtual seminar: https://t.co/7zDQisBt7i

[CFDE Workbench @CfdeWorkbench]

The @CfdeWorkbench team will showcase the #CFDE information portal (https://t.co/4km99ANAnc), the #CFDE data portal (https://t.co/I5BcDbJOI7), and #GeneSetCart (https://t.co/1dXVbaC5Ga) at #ASHG2024 #ASHG24. To learn more about the #CFDE visit booth 571. @NIH_CommonFund @CFDEKC

[Ma'ayan Lab @MaayanLab]

The Summer Research Training Program in Biomedical Big #DataScience in the @MaayanLab @IcahnMountSinai is accepting applications for summer session 2025! Application deadline is Feb 1. Program details: https://t.co/iSuyEy2V77

[Ma'ayan Lab @MaayanLab]

Join our Virtual Symposium in Big #DataScience on 8/8 @ 10 AM ET where the @Maayanlab trainees in the 2024 Summer Undergraduate Research Training Program in Biomedical Big #DataScience will present their research projects. Register: https://t.co/54kGNJtDtM

[CFDE Workbench @CfdeWorkbench]

Join us on Tuesday, June 25th at 1:00 PM ET for a virtual workshop introducing the Playbook Workflow Builder: https://t.co/WCYBgHh37V, a new #bioinformatics platform to interactively create #workflows with no coding skills. Registration: https://t.co/QwRO3vvE38 #genomics #omics

[AviMaayan @AviMaayan]

On Friday 5/31 @ 1 PM ET, members of the @CfdeWorkbench will introduce new tools to query the @LINCSProgram L1000 data and gene expression signatures automatically extracted from @NCBI #GEO https://t.co/5AUfjLcOYO register: https://t.co/ppsZpyQozx

[Communications Biology @CommsBio]

Rummagene is a search engine for gene sets, created by extracting human and mouse gene sets from supporting materials of >120,000 biomedical research publications: https://t.co/Mk93uwYQcR @AviMaayan @MaayanLab

[AviMaayan @AviMaayan]

RummaGEO: Automatic Mining of Human and Mouse Gene Sets from GEO https://t.co/dYqp416o1s

[NIH Common Fund @NIH_CommonFund]

Don't forget to tune in on 4/26 at 1PM ET to learn about the #NIH_CFDE program, the #Metabolomics Workbench (@MetabolomicsWB), & get the inside scoop on the Knowledge Center Portal. #DataEcosystem https://t.co/J86rwCSyoi

[NIH Common Fund @NIH_CommonFund]

The new #NIH_CFDE Data Resource Center will create a portal to catalyze user-friendly queries of Common Fund data sets and connect users to Common Fund resources to enable new discoveries only possible by searching across Common Fund data. https://t.co/JvsQA7Ue3u

[NIH Common Fund @NIH_CommonFund]

The Common Fund has rich datasets across many fields of biomedical and behavioral research, and the new #NIH_CFDE Knowledge Center will establish a knowledge network platform to enable scientists to answer questions using Common Fund data. https://t.co/JvsQA7Ue3u

[Ma'ayan Lab @MaayanLab]

Summer Research Training Program in Biomedical Big #DataScience in the @MaayanLab @IcahnMountSinai
ACCEPTING APPLICATIONS FOR SUMMER SESSION 2024 | Application deadline Feb 1 https://t.co/iSuyEy2nhz

[AviMaayan @AviMaayan]

Join the @MaayanLab Virtual Symposium 8/10 @ 10 AM ET where our trainees in the Summer Undergraduate Research Training Program in Biomedical Big #DataScience will present their research projects. Register:
https://t.co/BjYEuzMR51 #STEM #Bioinformatics #SystemsBiology #DataMining

[Communications Medicine @CommsMedicine]

💡 NEW RESEARCH @CommsMedicine - Evangelista et al. construct ReproTox-KG, a #toxicology knowledge graph for exploring the link between drugs, genes & structural birth defects | @MaayanLab @AviMaayan @CfdeNih
https://t.co/hRnPzVWiVn

[Icahn School of Medicine at Mount Sinai @IcahnMountSinai]

Data scientists at @IcahnMountSinai and colleagues have created an #ArtificialIntelligence model that may more accurately predict which existing #medicines, not currently classified as harmful, may, in fact, lead to congenital disabilities: https://t.co/aQB25dKcyq

[Ma'ayan Lab @MaayanLab]

Last month we welcomed the 2023 cohort of 12 talented undergraduates into our lab for 10-weeks as part of our Summer Research Training Program in Biomedical Big #DataScience https://t.co/iSuyEy2nhz

[Nature Cardiovascular Research @NatureCVR]

Amadori et al. show that plasma from patients with #atherosclerosis triggers unique inflammatory signaling in PBMNCs, which were used for selecting #drugs that may be repurposed for cardiovascular #immunotherapies|@ChiaraGiannare1 @djama85 @NYULHCVRC https://t.co/Eynh4unffZ

[AviMaayan @AviMaayan]

With this feature, that the @MaayanLab just added to #Enrichr https://t.co/6hB2xJcimf, you can now search for any term, and then download selected gene sets that contain to the search term in their annotation string. #Bioinformatics #Omics #DataMining #BiomedicalResearch #BigData