MULTI-SPACE Spatial Omics Platform

Is an inter-institutional collaborative #spatialbiology technology hub under @ResearchLifesci that offers access to cutting-edge #spatialomics technologies.

[Health + Life Science Alliance Heidelberg Mannheim @ResearchLifesci]

The @ResearchLifesci provides #seedfunds for testing #innovative ideas that rely on or develop high-end technologies within #CoreFacilities and Platforms not available at the applicant's host institution.
Apply by January 24, 2025.
More info on:
https://t.co/eJTct4vBPR

[SingleCellHD @sccHeidelberg]

🚨 Postdoc Opportunity! 🚨
Join the Laugsch Lab at @UniHeidelberg Institute of Human Genetics to explore Cornelia de Lange Syndrome with cutting-edge tools
🧪 70% Wet Lab | 💻30% Dry Lab
🔬 CRISPR, HiChIP-seq, RNA-seq, ATAC-seq
🔗https://t.co/t7OrOdc9Wq

[Natalia Gabrielli @natgabrielli]

Last seminar of the year for single-cell enthusiasts!
📅 Tuesday 17/12, 14:00 CET
📍 BioQuant, INF 267, SR41
Join @FlorianIngelfi1 to explore groundbreaking tools for tracing tissues at the single-cell level in space and time.
Host: @JulioSaezRod
Supported by @MSpaceAlliance.

[MULTI-SPACE Spatial Omics Platform @MSpaceAlliance]

@natgabrielli @Visiopharm @embl @uniklinik_hd @DKFZ @UniHeidelberg @unimedizinma @ResearchLifesci Still time to register

Dec 16, 2024 11:00 AM CET

Register in advance for this meeting:
https://t.co/E4snN1vELl

After registering, you will receive a confirmation email containing information about joining the meeting.

[MULTI-SPACE Spatial Omics Platform @MSpaceAlliance]

🚨 Webinar Tomorrow! Streamline #MultiplexImage analysis with #Oncotopix.
🗓️ Dec 16, 2024 | 11:00 AM CET 👉 Register here: https://t.co/o8cpTRs6od
For @EMBL, @uniklinik_hd, @DKFZ, @UniHeidelberg. Supported by @MSpaceAlliance #CODEX #ISS #seqScope and more

[MULTI-SPACE Spatial Omics Platform @MSpaceAlliance]

🔬 Discover #Oncotopix, the AI-driven platform for precision pathology by #Visiopharm.
Join us Dec 16, 2024, at 11:00 AM CET with Dr. David Mason.
📢 No bioinformatics skills required!
👉 Register here: https://t.co/o8cpTRryyF

[Natalia Gabrielli @natgabrielli]

Single-cell and Spatial Metabolomics Online Day is Live https://t.co/UR3Kzzs0nv via @YouTube
See you there!

[MULTI-SPACE Spatial Omics Platform @MSpaceAlliance]

🔊 Looking for a Postdoc in Digital Pathology? 🩺🧬🧫💻⚕️📊
✨ Don't miss the chance to join this outstanding team led by @DenisSchapiro!

🔗https://t.co/1OLJXTORxW

#SpatialOmics, #SpatialProteomics, #DigitalPathology

[SingleCellHD @sccHeidelberg]

Exciting Event @embl Heidelberg! 🎉
Don't miss this exceptional opportunity to hear from renowned experts:
🌟 Detlev Arendt
🌟 Ashok Kumar Jayavelu
🌟 MichaelEibl
🌟 Jovan Tanevski
🌟 Elena Buglakova
🌟 James Lucas Cairns

Gain insights in #singlecell and #spatialomics.

[SingleCellHD @sccHeidelberg]

📢 Workshop Alert
Interested in single-cell perturbation methods? Don’t miss the Statistical Methods for Post-Genomic Data workshop! 📊✨
📍 Heidelberg
📅 January 23–24, 2025
🔗Register https://t.co/owwPpNMy5x by December 20, 2024
Organized by @CarlMHerrmann & @OliverStegle

[SingleCellHD @sccHeidelberg]

📢 Join us for the 26th Single Cell Center Heidelberg Workshop!
📍 EMBL, Large Operon
📅 Thursday, December 5, 2024
🌟 Register: https://t.co/nd4InonFrx
Organized by @KarstenRippe, @JosephineBageritz, @CharlesGirardot, @natgabrielli, @Eileen_Furlong
Supported by @ResearchLifesci

[evo-devo @Xiaojie_Qiu]

We are thrilled to share that our first paper from my new lab, Spateo (https://t.co/a0BC0Cf3Ec) for spatiotemporal modeling of molecular holograms, is now online in Cell: https://t.co/UUZkyXYJtG. Spateo is a comprehensive analytical framework for 3D whole-embryo spatiotemporal modeling. Its advanced features include:
• 3D alignment and reconstruction at the whole-mouse-embryo scale (see the animation).
• 3D spatial domain digitization and cell-cell communication analysis to understand spatial gene expression gradients and both inter- and intracellular communication.
• 3D morphometric and volumetric analyses along with 3D morphogenesis vector field modeling to quantify dynamics such as surface area, volume, and cell density across organs, and to dissect the interplay between morphogenesis factors and cell migration.
• A “Google Earth”-like browser, Spateo-viewer (https://t.co/s33SS7jvYL and https://t.co/BbY6bIJtS0), for interactive and intuitive exploration of 3D spatial data.
• Additional features, such as RNA signal-based single-cell segmentation.

We are also honored that Nature “News and Views” has highlighted this work as well: https://t.co/8F4s6GJeBY.

This is really an amazing outcome after two years' heroic revision process that rewrite the entire paper using a new data (https://t.co/xbahWSeGgx) for whole mouse embryos.