Momeneh Foroutan

Senior Cancer Computational Biologist @ Zephyr AI; Co-founder of @RLadiesMelb; #STEMWomenChangemaker #sciart #scicomm #sepforoutan

[Momeneh Foroutan @S_Foroutan]

Thrilled to be featured in Magnify magazine's #STEM Arts Corner! Explore the fusion of #art, #science, and cultural heritage with a focus on #diversity & #inclusion. Grateful to the Magnify team @StemSistersau for the opportunity to share my #sciart story: https://t.co/dWnc0E0A93

[Nicholas Huntington @Dr_Nick_Bikes]

New publication from our lab 📣

https://t.co/zapoxSgzkw

We demonstrate that Histone methyltransferase, DOT1L, limits NK cell conversion to ILC1s, a subset that can be observed in tumors in response to TGF-β and is correlated with poor tumor control @HSudholz
@SebScheer

[Momeneh Foroutan @S_Foroutan]

@bhuva_dd @nhmrc @SAiGENCI Congrats Dharmesh!

[Momeneh Foroutan @S_Foroutan]

@JunyunLai @Nature @jack_chan15 @ChScheffler @I_mun0z @paulbeavis4 Congrats Jun!

[Momeneh Foroutan @S_Foroutan]

Awesome opportunity for doing your PhD with amazing people! Check it out.

[Geoff Macintyre @gjmacintyre]

Want to use CRISPR to mess with genomes and induce chromosomal instability? 4 year fully funded PhD position available in the Computational Oncology group at @CNIOStopCancer. Come join us in Madrid! https://t.co/jisPR9BooX

[Garnett Lab @Garnettlab]

First lab paper of 2024! An extensive update of our approach to systematically identify cancer dependencies, published today in @CancerCell. Amazing collaboration with @Francesco_i0ri0 lab. Open access link here: https://t.co/YLxXppESWa @DepMapSanger Tweetorial below.. (1/6)

[Momeneh Foroutan @S_Foroutan]

@Dr_Nick_Bikes @NatImmunol @SebScheer @HSudholz @AlinePfefferle Thank you so much Nick! 🙌 Grateful for the fantastic teamwork on this paper. Big shoutout to all the co-first authors for their hard work and collaboration. And a special thanks for your amazing leadership and mentorship throughout the process!

[Momeneh Foroutan @S_Foroutan]

Our latest work published in @NatImmunol integrates transcriptomic & epigenomic profiling to discover essential roles of Ikzf1/3 in NK cell development. Amazing team effort in @Dr_Nick_Bikes Lab, @SebScheer @HSudholz @AlinePfefferle Wilford Goh and others https://t.co/u9qjW7xCtw

[Waggoner Lab @LabWaggoner]

IKAROS & AIOLOS are important regulators of apoptosis, cytokine responsiveness and AP-1 transcriptional activity in NK cell development
@Dr_Nick_Bikes @AlinePfefferle @SebScheer @S_Foroutan @HSudholz Wilford Goh @NatImmunol https://t.co/aIbLebGUgZ

[Hao Yin @HaoYin20]

iSTAR (Inferring Super-resolution Tissue ARchitecture)

Predict spatial gene expression at single-cell & whole-transcriptome level
based on #Xenium (<1000 genes) #Visium (Not single-cell) #SpatialTranscritomics + HE histology

#HierarchicalVisionTransformer for histology feature extraction
trained on TCGA/GTEx/FLASH kidney
#Superpixel

Validated on Tumor/Brain/Kidney/TLS

vs #XFuse▶️>100 times🖥️efficiency

@DrMingyaoLi @NatureBiotech 2024
https://t.co/3G7sDsmQZO

[Rafael Irizarry @rafalab]

📣A second edition of our Introduction to #DataScience is on its way, now split into two books.

After teaching the course this semester, we've made significant improvements. Current drafts are online:

📘Intro: https://t.co/8DaGbDP4nq
📙Advanced: https://t.co/boveOOXb5Q
#rstats

[Momeneh Foroutan @S_Foroutan]

@srigsri23 @dr_opatel Thank you!

[Momeneh Foroutan @S_Foroutan]

Wrapped up 2023 showcasing my #sciart at RED's exhibition. Honored to exhibit with @dr_opatel, blending science and art. My work reflects the beauty in science and the optimism of medical advancements. Wishing all a belated Happy New Year filled with joy! #scicomm #cancerart

[Itai Yanai @ItaiYanai]

Here are my 12 guidelines for data exploration and analysis with the right attitude for discovery:
1. You never really finish analyzing a dataset. You just decide to stop and move on at some point, leaving some things undiscovered. 🧵

[R-Ladies Melbourne Inc @RLadiesMelb]

Come and visit R-Ladies at #ASC2023. Learn about what we do and how to join us @RLadiesGlobal @RLadiesCanberra

[Momeneh Foroutan @S_Foroutan]

@Dr_Nick_Bikes Thanks Nick 🥰🙏

[Momeneh Foroutan @S_Foroutan]

Burning Kiss: my #sciart, visualising interaction between a cancer cell (blue) and a T cell (red), leading to cancer cell death #apoptosis. The membrane blebs (sign of apoptosis) eventually detach from the cell, #apoptoticBodies, &amp; are engulfed and removed by phagocytic cells…

[Momeneh Foroutan @S_Foroutan]

This work was inspired by a combination of SEM #microscopy images and digital representations of cancer and immune cells taken from @sciencephoto as well as awesome microscopy videos by @RitterLab
#artmeetsscience #sciart #scicomm #cancerart #modernart #microscopyart

[Marie Trussart @MTrussart]

Learn more about the new #RUVIII-PRPS #R package for effective #normalization of #RNAseq by registering at my @abacbs workshop below:
https://t.co/uRT3iAbMYl

This is based on a novel method recently published by @RamyarMolania in @NatureBiotech @WEHI_research

[Arutha K @aruthak]

Join us next week for the 2023' #APAC #SpatialBiologySymposium in Korea @AkoyaBio @JoeYeong #SpatialoMics #ClinicaloMics #GroundTruth #LungCancer #SkinCancer &amp; #HeadNeckCancer #101plex #TLS #Immunotherapy

[R-Ladies Melbourne Inc @RLadiesMelb]

Find the examples and use cases from: https://t.co/Py6TwyOEWd