SymBioInfo

SymBioInfo is a bioinformatics software aggregation and sharing framework. Developed by @MnemosyneGenome we make bioinformatics simpler for our users

[Maria Nattestad @marianattestad]

Excited to announce the launch of the OMGenomics YouTube show!
https://t.co/xA2vGw9eVm

[SymBioInfo @SymBioInfoX]

Diamond (v0.8.36) added to #SymBioInfo bioinformatics stack - like protein blast but faster? - https://t.co/KoGPpY9o3J

[SymBioInfo @SymBioInfoX]

#Orthofinder added to the #SymBioInfo bioinformatics stack - methods for inference of orthology - https://t.co/pmFXk5kQLw

[SymBioInfo @SymBioInfoX]

#dlcpar (v1.0) added to the #SymBioInfo bioinformatics stack - a parsimony toolbox for phylogenomics - https://t.co/ABo3wQulJS

[SymBioInfo @SymBioInfoX]

Added FastME (v2.1.5) to the #SymBioInfo bioinformatics stack - a useful phylogeny inference tool - https://t.co/DOl9Tl4Tod

[SymBioInfo @SymBioInfoX]

@SAGRudd - new compute for #SymBioInfo? Please?

[SymBioInfo @SymBioInfoX]

Not liking BCCA license (https://t.co/lWmvf0tLyG) for #BioBloom - Kollector (sadly) won't be included in #SymBioInfo https://t.co/ni2w5toR3p

[SymBioInfo @SymBioInfoX]

Added #MultiQC (v0.9) to #SymBioInfo bioinformatics stack - clean aggregation of genomics logfiles by @tallphil - https://t.co/Cw9InEU6zH

[SymBioInfo @SymBioInfoX]

#Nanoblaster added to #SymBioInfo bioinformatics stack - BLAST like methods for @nanopore data by @ruhulsbu - https://t.co/OIs7Q2yt61

[SymBioInfo @SymBioInfoX]

#Stampy cannot be included in #SymBioInfo stack - non-commercial usage restrictions - better software out there but we like to encompass all

[SymBioInfo @SymBioInfoX]

Added #bxtools to the #SymBioInfo bioinformatics stack - development toolkit for @10xgenomics data by @JeremiahWala https://t.co/Yx4qkUvT8T

[SymBioInfo @SymBioInfoX]

#NextGenMap added to #SymBioInfo bioinformatics stack at (v0.5.3) - a short read mismatch aware mapper by @sedlazeck https://t.co/LtvT5DVqEN

[SymBioInfo @SymBioInfoX]

CLARK (v1.2.3) added to the #SymBioInfo bioinformatics stack - another useful sequence classification toolbox - https://t.co/iESjTg1NUA

[SymBioInfo @SymBioInfoX]

#KmerGenie updated to v1.7038 in #SymBioInfo stack - a great kmer counting application by
@RayanChikhi

[SymBioInfo @SymBioInfoX]

@PatSchloss - no slight on the "still" intended - rather, still awesome since the previous 1.38.1 release that was packaged :-)

[SymBioInfo @SymBioInfoX]

mothur updated to v1.39.2 in #SymBioInfo bioinformatics stack - still a fabulous 16S toolkit for microbial ecology by team @PatSchloss

[MacCocktail (@MacCocktail.bsky.social) @MacCocktail]

Warning: alcohol impairs...

[SymBioInfo @SymBioInfoX]

Megan6 (6.6.7) by @HusonDaniel added to #SymBioInfo stack - an attractive onestop interface for metagenomics https://t.co/REpCcvCkNc

[SymBioInfo @SymBioInfoX]

https://t.co/JHvYgvge8F is a precompiled JFX - packaged into RPM & SymBioInfo deployed - inelegant hack - but it works!

[SymBioInfo @SymBioInfoX]

JFX is not bundled in fedora or centos openJDK - installing Oracle java would be an admission of defeat ...