Zebrafish Developmental Genomics Lab

ZDG Lab at IIMCB, Warsaw, Poland. We study developmental processes by applying genomics approaches in zebrafish model organism.

[Zebrafish Developmental Genomics Lab @ZebraFishLab]

Our new preprint, just out on medrxiv: https://t.co/7uP4hLkcxP

[Zebrafish Developmental Genomics Lab @ZebraFishLab]

Asian Conference on Fish Models for Disease is officially open!

[Zebrafish Developmental Genomics Lab @ZebraFishLab]

@CostaParisi presenting our study on a novel enhancer for cardiac trabeculae #EZM2023

[Zebrafish Developmental Genomics Lab @ZebraFishLab]

New preprint from our lab! Also, do visit our new ZFCardioSCape (https://t.co/1atI0c5pHC) tool to visualize gene expression in the heart at single cell level :-) https://t.co/3GRC2j817t

[Zebrafish Developmental Genomics Lab @ZebraFishLab]

Fresh from ZDG lab @NatureComms!
We describe the role of Adar - adenosine deaminase responsible for A-to-I RNA editing, in zebrafish embryogenesis and innate immune regulation. So proud of you ZDGlab!! Awesome collab with Matthias Bochtler as well! 😊https://t.co/lzit8Zqyxl

[Merlin Lange @Merlin_Lange]

One week ago we released https://t.co/FP1UgRWmm5 the @czbiohub #scRNAseq dataset of zebrafish development with a very intuitive explorer.
The data is open access here https://t.co/PX0DX7Mkcr

In this #Thread I'm going to give you a tutorial on how to use #zebrahub 👇
1/n

[Zebrafish Developmental Genomics Lab @ZebraFishLab]

Our Maciej Migdal presenting xcore, an algorithm to model transcription regulators based on gene expression and ChIP-seq data (developed in collaboration with @b_kaczkowski & Arner lab, RIKEN). EMBL conference: Transcription and Chromatin.

[Zebrafish Developmental Genomics Lab @ZebraFishLab]

Proud to be part of this!

[DANIO-CODE @daniocode]

The comprehensive atlas of developmental regulatory elements in zebrafish is published today in @NatureGenet https://t.co/CjhNki9yj3. In addition to the BioRxiv submission https://t.co/koMC0IW6fH in this paper we added further resources and results. (1/n)

[Zebrafish Developmental Genomics Lab @ZebraFishLab]

Excited to host #singlecell workshop by 10X Genomics at our institute

[Zebrafish Developmental Genomics Lab @ZebraFishLab]

See you next year in Poland! #izfs2022 #izfs2023

[Costantino Parisi @CostaParisi]

Let's talk about how cool it is to study #cardiac #enhancers and the great potential of the #Zebrafish as a model #organism! 🐟🦓
I'm at position 13B, Mezzanine!
#IZFC2022 #Montreal

[EZS European Zebrafish Society @eu_fish]

If you are planing on attending Zebrafish meetings next year, the International meeting organised by @eu_fish umbrella, in Krakow, Poland July 9-13, 2023!

[Zebrafish Developmental Genomics Lab @ZebraFishLab]

ZDG in #IZFC2022

[Polish Zebrafish Society @Danio_polska]

Save your date for exciting lecture by Prof. Alexander Schier from @biozentrum @UniBasel_en. Join the lecture via MS TEAMS on Monday May 9th at 10 am (CET). Lecture organized by @UAM_IBMiB @UAM_Poznan

https://t.co/cEfmOjdq3l #Zebrafish

[IIMCB, Warsaw, Poland @IIMCB_Poland]

IIMCB Online #Seminar Invitation: @rovingscientist from @nyugrossman
🗓 24.03.2022
🕒 3:00 PM CET
🔗 ZOOM: https://t.co/C55wErSOIc
ID: 814 5582 0696
Passcode: 645795

#IIMCBOnlineSeminarSeries #sciencemeeting #developmentalbiology #humangenetics #seminar

[Lila Solnica Krezel 🇺🇦 @SolnicaKrezelL]

Hi, I think every #zebrafish researcher is planning to go to #IZFC2022 in Montreal - registration is now open! Looking forward to fantastic science and catching up with friends. See you there!

[VIBHOR KUMAR @VIBHORK72300624]

https://t.co/kvs0ih0rVR Pioneer search engine for #singlecell epigenome profile with large reference of singlecell transcriptome and epigenome. Applicable for multi-pupose #analysis of singlecell open-chromatin and some scChIP-seq #data. #genome # @bxv_genomics @scell_papers

[Piero Carninci @carninci]

Sequencing proteins through nanopores. This seems an impressive start!

[Piero Carninci @carninci]

Finally out, how to get along (between experimental and computational biologists). Science need both, let’s learn how to understand each other. Thanks to all authors for stimulating discussions! https://t.co/rXjJIClwCv

[Cai Lab @LongCai_Lab]

Our work "Integration of spatial and single-cell transcriptomic data elucidates mouse organogenesis" is now out at @NatureBiotech ! Congratulations to all the authors! https://t.co/3edEDr4pdu #seqfish #spatial #singlecell #transcriptomics