AIMlab

AI for immunological Molecules (AIM) group headed by Paolo Marcatili. We can mostly be found hiding behind the computer screen cracking immunological puzzles.

[AIMlab @ai_mlab]

This is huge, a game changer in the field. The results of the template free category are 🔥.

[Mohammed AlQuraishi @MoAlQuraishi]

CASP14 #s just came out and they’re astounding—DeepMind looks to have solved protein structure prediction. Median GDT_TS went from 68.5 (CASP13) to 92.4!!!! Cf. their 2nd best CASP13 struct scored 92.8 (out of 100). Median RMSD is 2.1Å. I think it's over https://t.co/dQ1BOJWuwn

[Ferenc Huszár @fhuszar]

2010: some people put papers on ArXiv
2012: we put papers on ArXiv after peer-review is done
2016: we put papers on ArXiv the day after deadline
2018: we just put stuff on on ArXiv
2020: you wake up with a headache and wonder if you drunk-posted something on ArXiv you will regret

[Biodatascience101 @Biodatascience1]

Just 5 more days to register for our second #Biodatascience101 workshop, introduction to #MachineLearning with an expert panel discussion from @novonordisk and @Rigshospitalet. 30th June 0900-1230 CET, with fundamental methods generalizing to all datasets.
https://t.co/Ovh7aNo8xv

[Roland Dunbrack 🏳️‍🌈 @rolanddunbrack.bsky.social @RolandDunbrack]

The Rosetta Commons is a consortium of >60 labs around the world that develop the Rosetta program for protein structure prediction & design. We have put together a "Black Lives Matter Statement." It's been signed by 297 RC members incl. 64 PIs. Please RT! https://t.co/orzq8OEUUm

[Biodatascience101 @Biodatascience1]

Registrations are open for our live introduction to #MachineLearning on tumor imaging features in #Jupyter notebooks, with model analysis in @scikit_learn !! Teaching directly in your browser. Join our online workshop on 30th June 0900-1230 CET. Sign-up: https://t.co/Jai8TPW6pe

[Biodatascience101 @Biodatascience1]

This team almost won a 25 000 USD kaggle competition. They shared an excellent write-up and Jupyter notebooks with code on how they predicted open ion channels from electrical signals using hidden markov models. @Gillesvdwiele

https://t.co/nkh9ktAW0Q

[Biodatascience101 @Biodatascience1]

We recently held our first online workshop, teaching biological data science to over 60 participants across the world.

Module 1 covered biomarkers of cerebral malaria, while Module 2 explored protein sequence feature impact on thermostability. Livestream: https://t.co/UPf0FW3Tln

[AIMlab @ai_mlab]

Last month we had our first BioDataScience webinar, and this book was a great source of inspiration! We also had the chance to see @ClausWilke in action at the #LinderstrømLang centre - amazing talk on covariation methods

[Biodatascience101 @Biodatascience1]

We can highly recommend this free ebook on #DataViz by @clauswilke:
https://t.co/1WXqQrIYZI

R code for many of the beautiful plots can be found on Github:
https://t.co/20ax0huekR

[AIMlab @ai_mlab]

Last spots left for our #BioDataScience101 webinar closing today! Live introduction to #Jupyter notebooks, data visualization and statistical analysis in #Pandas and #Numpy. 2 live notebooks, directly in your browser, delivered from
@DTU_HealthTech

https://t.co/qCpNzdmFHg

[AIMlab @ai_mlab]

Great to see that our work has an impact on fundamental research for the safety of people! This is what motivates us to work hard and improve
#publichealth #covid19 #immunology #machinelearning #datascience #vaccines https://t.co/kIGfCAyjhe

[AIMlab @ai_mlab]

Want to learn how to analyse high-throughput expression data, visualise millions of sequences at once, or set up a machine-learning model in 10 lines of code?
On March 26th from 9.00 to 17.00, BioDataScience101 will hold its first…https://t.co/gQUBJhXB3M https://t.co/gXCDE0fZ3O

[Protein Data Bank @PDBeurope]

Today's #PDB release includes the structure of the spike glycoprotein (6vsb) from the COVID-19 strain of coronavirus, solved by @McLellan_Lab @TexasScience, published @sciencemagazine. View all the @emblebi data on the COVID-19 strain at https://t.co/FMSEP2ndlW

[Alexandre Bonvin - also on Bluesky @amjjbonvin]

Patrick Aloy @ptck72 at #ABLS20 : “bioinformatics is heaven, cheminformatics is hell”

[Simon Rasmussen @simonrasmu]

Looking to do #bioinformatics at the Danish National Genome Center? 5 positions available!

[DTU Bioengineering @DTUbioengineer]

Researchers from @DTUbioengineer are the first in Europe to publish results on mapping proteins on a single-cell level using Mass Spectrometry-based proteomics. Read about that and about the state-of-the-art Protein Core facility. https://t.co/9iCii74OIR
@DTUtweet #research

[Wouter Boomsma @WouterBoomsmaDK]

Interested in doing a PhD with me @uni_copenhagen on #machinelearning for improving our understanding of #proteins? Open PhD call https://t.co/2DxsbQXFoG. Get in touch if you would like to apply (and meet the eligibility requirements). Deadline Feb 13.

[Gisle Vestergaard @gisleDK]

Great article about Nikolina Udikovic Kolics work showing how pharma pollution causes increased antibiotic resistance right here in Europe. https://t.co/yNUBNlhpOY

[Kresten Lindorff-Larsen @LindorffLarsen]

PhD positions in Structural Bioinformatics available to work with me and @_amelie_rocks in 🇩🇰. If you love proteins and are interested in using computational biophysics and sequence analysis to study effects of protein variants at large scale have a look https://t.co/DsldVjP3ry

[Michael Boutros @Michael_Boutros]

We are hiring a PhD student to work on colon cancer disease modelling using patient derived organoids. Collaboration with Matthias Ebert @prof_ebert.

Apply now through the @DKFZ international #PhD program: https://t.co/UIHkdCKPZy

Application deadline: Jan 5th, 2020. Please RT