Anima Sutradhar

PhD candidate @EdinburghUni 🧬 trying to understand life one codon at a time. Molecular biology, transcriptomics, biological language modelling.

[Giovanni Stracquadanio @DrStracquadanio]

Great collaboration as usual with @ProfTomEllis on a fantastic #synthetic #genomics project led by @Xinyu80256297 with help of our own @astrdhr . Check it out! @SBSatEd @EdEngBio

[Anima Sutradhar @astrdhr]

Thank you so much for having me @GenomicsEdi, and making me love genomics even more! Definitely the most stunning place I've ever presented in as well.

[One Health Genomics Edinburgh @GenomicsEdi]

And our final ECR speaker for session 2 is Anima Sutradhar (@astrdhr), who is telling us about her pipeline for researching codon usage in E. coli, CUBseq #ENGoGS23

[Anima Sutradhar @astrdhr]

@RachelLukowicz Wow what a beautiful way of sharing with friends and family (you've definitely inspired me to do the same!), and love the illustrations!

[Giovanni Stracquadanio @DrStracquadanio]

Excited to share our very latest work led by @astrdhr analysing #codon #usage in #ecoli using a whopping 6,763 #RNAseq datasets. A great collaboration with @FujifilmDiosyn. @SBSatEd @EdEngBio Check this out!

https://t.co/imCRyrwZwx

[Anima Sutradhar @astrdhr]

@Vaishle1 dm'd you!

[Anima Sutradhar @astrdhr]

If you’re at #ISMBECCB2023 and interested in large-scale codon usage analysis, come find me at poster B-134 today at 6pm! Also looking to meet anyone working with LLMs!

[Anima Sutradhar @astrdhr]

Hi everyone, please come along to what will be a very interesting talk by @sudpinglay! This will be a joint session with @EUSynBioS and @EdEngBio/@SBSatEd, taking place in the Waddington Seminar room. All welcome to join in-person or via the Zoom link 🧬

[EUSynBioS @EUSynBioS]

Join the next #EUSynbioSeminar in collaboration with the @EdinburghUni and hear @sudpinglay from NYU, give a talk titled “Synthetic Regulatory Genomics: genome writing to understand gene expression control“

Register via QR code or https://t.co/v9ShAoYFWH

[Anima Sutradhar @astrdhr]

First time attending CSHL Biology of Genomes #BoG23 and absolutely fell in love with the energy here! 🥰 Learned a lot, met incredible scientists, made a lot of friends and had the most beautiful weather! Thank you to all those who visited my poster, preprint coming very soon! :)

[Giovanni Stracquadanio @DrStracquadanio]

If you are attending @CSHL #BoG23 stop and say hi at @astrdhr poster and check what we learned about codon usage in #ecoli after analysing ~7,000 RNA-seq samples. A great collaboration with @FujifilmDiosyn. More to come soon. @SBSatEd @EdEngBio

[Giovanni Stracquadanio @DrStracquadanio]

Generative #AI can design thousands of proteins in seconds, but can we screen them all? Introducing our automated, bacterial enzyme screening platform w/ @opentrons. Now waiting for @neochromosome lib @obligatoryMH @biomed_ai_geno @astrdhr @SofijaSemeniuk @sebestyenkamp @SBSatEd

[Giovanni Stracquadanio @DrStracquadanio]

Finally we got our lab picture, courtesy of @EdinGenFoundry. What a team! @marti_kasprzyk @SofijaSemeniuk @sebestyenkamp @biomed_ai_geno @astrdhr @obligatoryMH @SBSatEd @EdEngBio

p.s. no robot was hurt in the process.

[Anima Sutradhar @astrdhr]

@ewjwallace @DrStracquadanio @gcaravagna @nextflowio Sure thing :)

[Giovanni Stracquadanio @DrStracquadanio]

Are you interested in how we use #AI, #synthetic #biology and #automation to design new therapies for #Fabry disease? Check this out: https://t.co/dRRiVq4Ju7. Thanks @marti_kasprzyk @obligatoryMH and @astrdhr. @SBSatEd @EdEngBio @EdiCenBio @EPSRC @fabryintnetwork @MPSSocietyUK

[Giovanni Stracquadanio @DrStracquadanio]

Congrats to @astrdhr for passing her first year annual review with flying colors! Monumental work on #ecoli transcription that we hope to share with everybody very soon. Brava! A special thanks also to @FujifilmDiosyn for the support. @SBSatEd @SynthSysEd

[Giovanni Stracquadanio @DrStracquadanio]

Well done to #Peter #Vegh @EdinGenFoundry and @astrdhr for presenting our new #genomics & #transcriptomics work at the The Next Generation of Genomics Symposium @GenomicsEdi @SBSatEd @SynthSysEd

[Anima Sutradhar @astrdhr]

Here's the original illustration, for anyone who wants a closer look :) representing everyone's personal connection to science #scicomm #sciart #procreate

[Giovanni Stracquadanio @DrStracquadanio]

Finally having a proper illustration specialist in my lab:) Well done @astrdhr for your artwork in @eusci !