Juma Bayjan

Bioinformatics. NGS data analysis. Bacterial (meta)genomics. Disclaimer: Tweets are my own opinions. Neither Retweet nor Like is an endorsement.

[Michael Waskom @michaelwaskom]

Now published in @JOSS_TheOJ, a paper about a new plotting library that may be of interest:

https://t.co/T5GWh5LvsM

[Elisabeth Bik @MicrobiomDigest]

These are my grandfather's old medical books from the 1950s and '60s. Mostly in Dutch, some with underlining and notes. We tried to sell them on Marktplaats (Dutch website) but no one seems to want them. That makes me sad.

I guess the only option now is to toss them 😢

[Juma Bayjan @bayjan]

@Sergi_Arredondo Congratulations and good luck!

[Juma Bayjan @bayjan]

@avehtari @mcmc_stan I have a very limited knowledge on this topic, but find it interesting. How well does this "HMC+Laplace" compare to "Variational Inference" both conceptually as well as in terms of computational speed? Thank you very much.

[Juma Bayjan @bayjan]

@news_ub @RobinMay9 @LES_UniBham @foodgov @WvSchaik @unibirm_MDS @IMIBirmingham Congratulations Willem!👏

[Nicolas Galtier @GaltierNicolas]

Together with @celimouseMontp and @freddelsuc, it is our great pleasure to announce the publication of the Open Access "Phylogenetics in the Genomic Era" book
https://t.co/u9DBeyLT3U #OA #PGE #Phylogenomics
(1/6)

[Juma Bayjan @bayjan]

Thank you for this very good resource!

[Juma Bayjan @bayjan]

@MarcBonten Very good point. First I read about it elsewhere and then twitted it without giving any second thought. I think current status of countries can't easily be reduced to a single such factor.

[Juma Bayjan @bayjan]

@MarcBonten This might be useful; though, only read its abstract: "Correlation between universal BCG vaccination policy and reduced morbidity and mortality for COVID-19: an epidemiological study" https://t.co/2TRefmohwD

[Marc Bonten @MarcBonten]

As of today healthcare workers are enrolled in #BCGcorona study @UMCUtrecht @Radboud_Uni

[Michelle Sheehan @MiShee54]

Cambridge University Press has just made all 700 textbooks currently available in HTML format on Cambridge Core free to access until the end of May to assist readers during the Covid-19 outbreak. This also includes 58 textbooks in Language and Linguistics. https://t.co/TFhUaANkXE

[David Sinclair @davidasinclair]

Since my Harvard lab closed yesterday, I've been reading and interpreting this week's published papers on #COVID19. What follows is a thread of information, my interpretation, links to sources & predictions. Let's start with what you need to know... #coronavirus #COVIDー19

[Leland McInnes @leland_mcinnes]

The first release candidate for UMAP 0.4 is out providing lots of new features, including performance improvements, embedding to different manifolds, inverse transform, and plotting tools.

[Aldert Zomer @aldertzomer]

Looking for a postdoc! Interested in data analysis challenges arising from high-throughput sequencing and analysis of microbiome and resistome data ? apply here -> https://t.co/VBTsl8divm please RT

[Juma Bayjan @bayjan]

Also happy that I was involved in this work. Congratulations to all authors.

[Frank Harrell @f2harrell]

100 pages of online course notes added for Regression Modeling Strategies: intro to survival analysis and parametric survival models: https://t.co/VCnSFfXZKR now 504 pages #bbrcoourse #Statistics @vandy_biostat

[Eran Segal @segal_eran]

A great microbiome resource by @nsegata @kyrpides of 280,000 genomes and 625,000,000 genes!
More than doubles the previous gene catalog. Still much to discover since 70% of species do not have cultured representatives and 40% of genes unannotated
https://t.co/2FhAh1iIl4

[Juma Bayjan @bayjan]

@nixcraft It's Terminal.

[Juma Bayjan @bayjan]

@pathogenomenick @tattooedbakers Congratulations!