👀@deeptracer can model DNA/RNA now. Of course, no one expects it can guess the nucleotides side chain correctly, but still, this will save a lot of time for modeling. I tested it out on my SSRV1 dimer having A-DNA. It took 5 minutes to get this🤯
https://t.co/xTNKSVICAi
The undergraduate research by Luca Chang, Kiernan Connolly, and Hanze Meng in collaboration with Dr. Fengbin Wang, Dr. Edward H. Egelman, et al. is officially published in Biophysical Journal - Cell Press. https://t.co/ygg8HffmYu
We are excited to introduce DeepTracer-ID, a novel tool developed by 𝘂𝗻𝗱𝗲𝗿𝗴𝗿𝗮𝗱𝘂𝗮𝘁𝗲 𝗿𝗲𝘀𝗲𝗮𝗿𝗰𝗵𝗲𝗿𝘀 Luca Chang, Kiernan Connolly, and Hanze Meng to identify protein de novo from cryo-EM map. Thanks to all collaborators around the world. https://t.co/ZdN6teTAjy
We are excited to introduce the desktop version of DeepTracer to the world. If you are a non-profit researcher, please simply request the Academic Free Software License from https://t.co/8YAOBa2u86. 💻🖥️🧑🏫🧑🎓
Congratulations to DAIS students and collaborators for publishing on the WIREs Computational Molecular Science - Artificial intelligence advances for de novo molecular structure modeling in cryo‐electron microscopy https://t.co/qWnReDgbZe
I've been happily using #cryoEM#DeepTracer for a while https://t.co/Y6tL0629lM Out of curiosity, I tried to submit a map of a tail of phage P68 solved at 3.9 A (EMD-4435), which I built manually ~3y ago. This was a really hard nut to crack. Deeptracer solved it in 30 minutes...
Congratulations to DAIS graduate student Jonas Pfab on publishing the PNAS paper, co-authored with Nhut Min (Jack) Phan. “DeepTracer for fast de novo cryo-EM protein structure modeling and special studies on CoV-related complexes” https://t.co/wYNEyp32CG