Dr. Sebastian Köhler

Expert AI engineer@adahealth. Co-founder of @hp_ontology and @phenomizer - work on digital health, ML, ontology. Member of @MonarchInit.

[Solidaritätsnetzwerk Berlin @solinetzberlin]

Die Linse muss bleiben!

Zusammen mit @Potse_Berlin und Libero e.V. haben wir heute eine gemeinsame Pressemitteilung veröffentlicht!

[HPO @hp_ontology]

HPO goes international in our new publication «The Human Phenotype Ontology in 2024: phenotypes around the world»

https://t.co/RHMXT3Mim8

[Dr. Sebastian Köhler @drseb_]

Big announcement today. @hp_ontology goes multi-lingual: https://t.co/cqNT1jniiC

Thanks to all translators, @NicoMatentzoglu, and @pnrobins

@MonarchInit

[Dr. Sebastian Köhler @drseb_]

@dagarfield @StefanMundlos 👆

[Dr. Sebastian Köhler @drseb_]

@sampaccoud Phenomizer hasn’t been updated in a long time. Sorry about that

[Dr. Sebastian Köhler @drseb_]

@GestaltMatcher Suggestion: use @hp_ontology maybe they will retweet

[Peter Robinson @pnrobins]

Enriching Representation Learning Using 53 Million Patient Notes through Human Phenotype Ontology Embedding https://t.co/0wJYwp8vnv

[Deepak Unni @deepakunni3]

Congratulations to @ontowonka and the #N3C team for winning the Grand Prize on #DataSharing as part of the @FASEBorg DataWorks! Challenge! 🎉

And even more congratulations to @ontowonka and the @MonarchInit for winning the Distinguished Achievement Award for #DataReuse! 🎉

[SNOMED International @SnomedCT]

Our recent agreement with @MonarchInit to develop maps from #SNOMEDCT to @hp_ontology and to @hp_ontology from #SNOMEDCT will help advance research into hereditary and genetic conditions and improve #interoperability: https://t.co/T0wM2FzJ6v
@CUAnschutz, @ontowonka @sro_healthIT

[SNOMED International @SnomedCT]

We recently signed an exciting collaboration agreement with @MonarchInit! As part of the agreement, the organizations will work together to develop maps from #SNOMEDCT to @hp_ontology and to @hp_ontology from #SNOMEDCT. Learn more: https://t.co/T0wM2FzJ6v

[Dr. Sebastian Köhler @drseb_]

Wow. Somebody using phenogramviz. Nice. Original paper was this: https://t.co/VxEY3bjEcs

[Peter Robinson @pnrobins]

@hp_ontology @MonarchInit Phenograms to analyze structural variants in a neurodevelopmental disorder https://t.co/bp7bEzb5Rd

[Daniel Ochoa John @dochoaj]

@sarah_edo Absolutely! We should never forget that "legacy" systems were written by people doing the best they could to generate impact/ship features and so. IMO we should never underestimate that and we better learn from it and plan to evolve it in an organic way.

[HPO @hp_ontology]

The @phenomizer algorithm by @drseb_ in 2009 has been adapted and applied to identify generalisable clusters on persons with #LongCovid

[Dr. Sebastian Köhler @drseb_]

„it may be useful to introduce specific training modules on the use of HPO nomenclature both in medical school curricula and in post-graduate clinical training programs.“

Anybody here want to share thoughts on how we could make this happen? @hp_ontology

[Dr. Sebastian Köhler @drseb_]

Not any expensive standard is requested. Instead: free and truly open standards that have been proven to work. Read the paper at https://t.co/oL4TnQWSyE

[Peter Robinson @pnrobins]

@hp_ontology @MonarchInit
Bridging the language gap - A call for the wider use of Human phenotype ontology by non-geneticist clinicians when requesting genomic tests
https://t.co/RQipSHzKkB

[Dr. Sebastian Köhler @drseb_]

I am also on mastodon now at @[email protected]

[HPO @hp_ontology]

HPO now also at mastodon. See @[email protected]

[Dr. Sebastian Köhler @drseb_]

@cthoyt @hp_ontology Ping @pnrobins

[Dr. Sebastian Köhler @drseb_]

If you have a github account and are a fan of open standards for describing human symptoms and clinical descriptions, please „star“ the human phenotype ontology project on github. @hp_ontology #freestandards #openstandards

[Dr. Sebastian Köhler @drseb_]

@BHaarbrandt 😁