FarmGTEx

The Farm Animal Genotype-Tissue Expression (FarmGTEx) Consortium amis to provide a atlas of tissue-specific gene expression and regulation in livestock species.

[FarmGTEx @ex_farm]

The PigGTEx resource is out now (https://t.co/afultip2u1). Congratulations to @LingzhaoF @QGG_AU and the global team. Here is the BioRxiv version: https://t.co/sQROcs4nU8. Hope you enjoy it. Please help spread it widely. Thanks!

[Konrad Rawlik @kcrawlik]

The🐷GTEx is here. Regulatory variants (eQTLs, sQTLs and more) across 34 tissues in pigs and lots of follow-on analyses. Great work from the FarmGTEx consortium led by @LingzhaoF.

[Konrad Rawlik @kcrawlik]

If you like this one you might also like the earlier work on the 🐄GTEx published earlier this year https://t.co/blgfAMERns

[Leilei Cui @leilei_cui]

👏👏👏

[bioRxiv Genomics @biorxiv_genomic]

A compendium of genetic regulatory effects across pig tissues https://t.co/Zn40qlFc4h #biorxiv_genomic

[bioRxiv @biorxivpreprint]

A compendium of genetic regulatory effects across pig tissues https://t.co/JLyFWVTxer #bioRxiv

[Lingzhao Fang @LingzhaoF]

I am so thrilled to share our PigGTEx resource, as part of the FarmGTEx project. Here we provide the first comprehensive atlas of regulatory variants (e.g., eQTL) across 34 tissues in pigs, and show its importance in studying complex trait genetics and human biomedicine.

[Konrad Rawlik @kcrawlik]

How cool is that, the CattleGTEx paper has made the Nature Genetics cover😎. Current issue contains both, research briefing on paper and FarmGTEx 🧑‍🌾🧬🐄🐷🐔more broadly (https://t.co/piL5nwNwzp) and the paper itself (https://t.co/blgfAMEjxU)

[FarmGTEx @ex_farm]

It is soooo cool to see that the CattleGTEx made @NatureGenet Cover! Welcome to join the next phase of CattleGTEx. Please contact [email protected] for more details. The FarmGTEx website (https://t.co/OAMwrfKIFF) will be online soon.

[Nature Genetics @NatureGenet]

‼️ The September issue of @NatureGenet is out!🤩
Featuring:
✅ A method to map sQTLs
✅ Autism genetics
✅ Physical activity GWAS🏃🏾‍♀️
✅ Genetic risk of Crohn's disease
✅ Genomics of paediatric ALL
✅ Somatic variation in hiPSCs
AND MUCH MORE‼️
https://t.co/KAht0OUpPL

[Genome Biology @GenomeBiology]

Yao, Liu, @CharleyASummer, Gao, Pan, Liu, @LingzhaoF, @AlbertTenesa & co compare the transcriptomes of human and cattle from 20 tissues. Much about expression, including eQTLs, are conserved between the species. Heritability is higher for conserved genes https://t.co/5UwIbUnXTh

[Javier Santoyo @jsantoyo]

A multi-tissue atlas of regulatory variants in cattle. #CattleRegulatoryVariants #TissueVariantAtlas #CattleGTEx @GroupTenesa @LingzhaoF @NatureGenet
https://t.co/U9d3b5q4jw

[Erola Pairó Castiñeira @erolaPC]

Congratulations @LingzhaoF and the whole team! 🐄

[James Prendergast @JGDPrendergast]

https://t.co/IAMGtQzstZ

[Lingzhao Fang @LingzhaoF]

This is a great moment for the FarmGTEx project. Our pilot CattleGTEx work is online in @NatureGenet now. The new phase of CattleGTEx is starting now. Please contact if you are interested in. Together we build a comphensive FarmGTEx atlas!

[Nature Genetics @NatureGenet]

‼️ ONLINE NOW @NatureGenet
📰 A multi-tissue atlas of regulatory variants in cattle
🧑🏾‍🤝‍🧑🏼 George E. Liu @AlbertTenesa Lingzhao Fang and team
⬇️🐄⬇️
https://t.co/56TqBlrd8E

[Jian Yang @jyang1981]

"For many decades claims have been made that quantitative genetics was dead or dying but, condescendingly, perhaps still useful until the contents of the black box were revealed, a feat which would be ‘just round the corner’. " - William G. Hill https://t.co/BijX39M5Zm

[Erik Garrison @erikgarrison]

We've made a draft human pangenome! 47 haplotype-resolved assemblies, two reference genomes, and five pangenome graphs!

[James Prendergast @JGDPrendergast]

A beginner’s guide to assembling a draft genome and analyzing structural variants with long-read sequencing technologies https://t.co/T494vjJpNf

[Ruidong Xiang @RXiang5]

Legend Theo Meuwissen presents an elegant analysis to show including causal variants improves genomic prediction accuracy @wcgalp2022 #WCGALP2022