Top Tweets for #Directedevolution
Next-gen CRISPR enables precise gene edits; DE-GE combo boosts crop traits by crafting functional mutations. #CRISPR #DirectedEvolution @OxfordJournals
Details: https://t.co/l1Wo9pr9RQ

The iDEC Festival is happening this weekend at the University of Cambridge!✨
Over 200 participants from around the world will present their exciting projects — can’t wait to see what surprises they bring! 🔬🌍
#iDEC2025 #iDEC5Years #SyntheticBiology #DirectedEvolution

You get what you screen for, but dangit, I'll always be 😍 for these clever screening and selection experimental designs #DirectedEvolution
Rubisco is (arguably) the most abundant protein on Earth. (LPP surely comes close, right?) It’s an enzyme that fixes CO₂ into sugars during photosynthesis.
Unfortunately, as most people learn in school, Rubisco is inefficient. Sometimes it confuses O₂ for CO₂ and wastes energy. Plants make up for this in raw concentration; up to half the soluble protein in a leaf is Rubisco.
People have been trying to engineer better Rubiscos for many decades, but it's not easy because the proteins are big, do not fold easily (they need chaperone proteins to help out), are made from 16 subunits in land plants.
But there's a new paper in Nature Plants that looks really interesting. The TL;DR is that a group in Australia figured out how to express plant Rubiscos (and all SEVEN of their folding chaperones) using a set of 3 plasmids inside of E. coli cells. This enabled them to do "directed evolution" of Rubisco in bacterial cells, and quickly find Rubisco mutants that have higher enzymatic efficiency or that fold better.
In addition to the 3 plasmids, the researchers also coaxed E. coli to make ribulose-1,5-biphosphate, or RuBP, which is the 5-carbon sugar that Rubisco smashes into carbon dioxide to make molecules of 3-PGA for central metabolism.
Now, the clever bit is that you RANDOMLY MUTATE the three plasmids encoding the Rubisco to make millions of variants. Then, you transform those mutated plasmids into E. coli. If the E. coli do NOT make a functional Rubisco, RuBP levels build up and kill the cell; the molecule becomes toxic. But if the E. coli DO make a functional Rubisco, then they keep the RuBP levels in check and live just fine.
Using this "screening assay," the researchers found 46 fast-growing colonies of E. coli. Two of those colonies encoded really useful mutations. One mutation (M116L) makes Rubisco about 25–40% faster. The other (A242V) makes it fold and assemble much more efficiently.
They put this mutation into a "hybrid Arabidopsis–tobacco Rubisco," put that into tobacco plants, and measured growth. The plants with M116L grew 75% faster than wildtype.
No guarantees this will scale to more useful crops, like wheat and corn and soybeans etc. But it seems like a nice in vitro assay for faster prototyping!

I think we will soon have AI tools to genetically encode--i.e., make #enzymes for--many useful chemical transformations. On our way to getting biology to do all the chemistry we love (and think only humans can do). #directedevolution #MLDE #proteindesign
Check out our new perspective "Illuminating the universe of enzyme catalysis in the era of artificial intelligence" now out in @CellSystemsCP !
We discuss a vision and path forward for genetically encoding almost all chemistry, powered by new AI tools:
https://t.co/Tc7zQ6TExm
#DirectedEvolution of Copper-Substituted Nonheme #Enzymes for Enantioselective Alkene Oxytrifluoromethylation by James G. Zhang and Xiongyi Huang (@xiongyih) in @J_A_C_S https://t.co/VaXT6PEjYd

Really proud of this work by Jae Kennemur and Yueming Long. #Enzymes rock, with a little help from #directedevolution to do #chemistry not known in nature (and not easily done by humans).
#Enzymatic Stereodivergent Synthesis of Azaspiro[2.y]alkanes by Jennifer L. Kennemur, Yueming Long, Catherine J. Ko, Anuvab Das, and @francesarnold at @CaltechCCE in @J_A_C_S https://t.co/exw8bND4qJ
![EnzymeChemistry's tweet photo. #Enzymatic Stereodivergent Synthesis of Azaspiro[2.y]alkanes by Jennifer L. Kennemur, Yueming Long, Catherine J. Ko, Anuvab Das, and @francesarnold at @CaltechCCE in @J_A_C_S https://t.co/exw8bND4qJ https://t.co/E1davVfdGE](https://pbs.twimg.com/media/GwexOMnXUAMZNYb.jpg)
Join us! We are looking for a new team member (PhD student) with strong background in organic chemistry.
🙏 RETWEET (We want to recruit internationally)
Organic chemistry meets #DirectedEvolution
Highly interdisciplinary & passionate research group
https://t.co/YthVJyynS2
Hey, I've got the inside tip on our next must #MANdate $cience project "If it ain't #mRNA you ain't going all the way!"
What's a little #DirectedEvolution amongst #AugmentedHumans, YaKnow #SyntheticBiology #MolecularCommunication #BioDigitalConvergence #AI @JimJustice_WV #MABA #X
Mass vaccinating poultry with non-sterilizing H5N1 vaccines (mRNA or single-antigen) will accelerate viral evolution—fueling deadlier strains and raising the risk of a human pandemic.
This plan should not even be on the table.

By combining unsupervised ML with our prior work on ML-guided directed evolution, we’ve eliminated the guesswork in designing sensors—no need to guess how to randomize mutations or starting libraries.
#directedevolution
Pfizer makes the virus more potent!
#PfizerExposed #PfizerGate #DirectedEvolution
https://t.co/4qdlijreUl
Fact Check: True. #DirectedEvolution
No one should EVER take anything mRNA https://t.co/OiSjbfUqWo
Designing Enzymatic Reactivity with an Expanded Palette; @reubenlg #biocatalysis #directedevolution #noncanonicalaminoacids #photobiocatalysis #unnaturalcofactors https://t.co/SgzxQheq2l
#ChemBioChem #DirectedEvolution of Fluorescent Genetically Encoded Biosensors: Innovative Approaches for Development and Optimization of Biosensors (Nikita Kuldyushev) • https://t.co/v1BRzsm1tS
🌍 Exciting news! This summer, my group joins @mpi_marburg to create photoenzymes for solar energy conversion & carbon capture. With #ProteinDesign 🖥️ & #DirectedEvolution 🧬, we’ll push enzyme design to new limits for a sustainable future!
#Hiring https://t.co/7ljLOXsc4k
Check out our new review we wrote with @shaunmckinnie @robbieashepherd looking at the interface of MS for screening large mutant libraries like those associated with #directedevolution https://t.co/TFQt8vZ3th
Very relevant to #DirectedEvolution and what transition vs. transversion mutations do if they happen at the 2nd base.
TIL when you sort the codon wheel by the second base the quadrants align with the properties of the amino acids being coded for and also it looks like the mystic sigil of the coven of the four bases
https://t.co/EtVEY8lZqe

New paper from our lab @eLife. We show how #DirectedEvolution reshaped #CRISPR for expanding DNA recongition.
Enhanced flexibility improves the recognition of canonical and alternative PAM sequences.
https://t.co/U63LjVowcK

Optimized #DirectedEvolution of E. coli leucyl-tRNA Synthetase adds many Noncanonical Amino Acids into the Eukaryotic Genetic Code Including Ornithine and Nϵ-Acetyl-Methyllysine (Abhishek Chatterjee and co-workers) @AChemSynBio • https://t.co/4V4IklmL4L
Evolutionary Specialization of a Promiscuous Designer Enzyme; @reubenlg L. Tiessler-Sala, H. J. Rozeboom, A. W. H. Thunnissen @jeandidiermare1 & G. Roelfes #Biocatalysis #DesignerEnzymes #DirectedEvolution #XrayCrystallography https://t.co/OYanCG7a0e
Aptamers, RNA equivalents of antibodies, are typically generated from in vitro selection. Our new paper https://t.co/lyekANPCE4 in @NatureComms revealed a mechanism to select aptamers in cells as part of the CRISPR sgRNA. #Aptamer #directedevolution #CRISPR
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