Top Tweets for #HDSt
Benchmarking sequencing-based #SpatialTranscriptomics methods
#10xVisium
#HDST
#BMKMANUS1000
#SlideseqV2
#Stereoseq
#PIXELseq
#DBiTseq
🐭adult brain/adult olfactory bulb/e12.5 embryo
1⃣Molecular capture efficiency
2⃣Molecular lateral diffusion
Spatial accuracy of mRNA detection, dictated by tissue & permeabilization
3⃣Clustering + Cell state annotation
🧐Different ST methods yield inconsistent cell-cell communication results by #CellChat v1.6 or #CellPhoneDB v4
bioRxiv 2023
https://t.co/khKH10T1Hi
🚨PREPRINT ALERT🚨
Systematic comparison of sequencing-based spatial transcriptomic methods🫶
#ST #benchmark #Visium #HDST #BMKMANUS1000 #SlideSeq #StereoSeq #PIXELSeq #DBiTseq
👉https://t.co/6iQQVJltDU
Vesalius performs tissue anatomization from spatial transcriptomics data. It features detection of tissue territory and anatomy associated genes. By @pcnmartin #transcriptomics #HDST #SlideSeq
https://t.co/ak8JTXGNHz
History is altered, the present is flawed and the future is at stake. #HDST #DataScience #Talk02
https://t.co/LK1ewkmYOP
#HDST (high-definition spatial transcriptomics) relates transcriptional profiles and histopathology and has a resolution (correction: 2-µm) 1,400-fold higher than standard spatial transcriptomics!
A dense, spatially-barcoded bead array marks an improvement for #Spatial #Transcriptomics and captures 100,000s of barcodes at 2mm resolution. Check out this paper by Sanja Vickovic @broadinstitute and Joakim Lundeberg @scilifelab https://t.co/0zoFnam7BC
High-definition spatial transcriptomics for in situ tissue profiling | Nature Methods #HDST https://t.co/xCjJDqF6p0
High-density spatial transcriptomics arrays for in situ tissue profiling | #SpatialTranacriptomics #HDST https://t.co/UydeVVSwcU
We're over the moon to announce that @HDSpeechtherapy are ready to race, and are back with us as Gold sponsors for their second year of the #CGChallenge!
Thank you to the entire team over at #HDST, see you in September! 🚴🏃🚴🏃🚴🏃
#RunRideWalk #CorporateForCommunity #Charity
We'll need next-generation telescopes to really know if we're alone in the universe. https://t.co/Yar0R5EErO
Yaay..Got my copy...banging album #Metallica still got it thank you for #HDST more than worth the wait...
2030-2039 – The High-Definition Space Telescope (HDST) is operational https://t.co/Y5xicRu2Bz #Hubble #spacenews #futurology #futurist #HDST
Roederer: need UV. Today if you want a UV spectrum you need #HubbleSpaceTelescope. In the future #HDST or #LUVOIR #FirstStarsV
I discuss a perhaps-not-entirely-original idea on the Twinnovation podcast live from SXSW! https://t.co/LrgZTZLrKP #hdst
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