Top Tweets for #SysBio
Don't be clueless! Better, understand how Julia thinks:
@code_lowered 2 + 3
@code_lowered 2 + 3.0
@code_lowered 2.0 + 3.0
Code better. Code smarter.
#JuliaLang #computing #sysbio #systemsbiology #qbio
High-throughput omics studies > lots of data transformations> 5,000 correlations to be tested through experiments.
Toy models with few parameters > the design principles behind the complexity of Life.
True Systems Biology: fewer spreadsheets, more 'Aha!' moments. #sysbio
We are recruiting PhD students and postdocs across the board in ML, bioinformatics and cancer biology. Interested in #sysbio #bme #genomics, apply trough our website: https://t.co/kAIKdt7S5W @NYGCtech @nygenome @Cancer_dynamics @Columbia @ColumbiaBME @uppsalauni @scilifelab
Identical genome. Same environment. Totally different life choices. Turns out even cells have an identity crisis. #sysbio #physicsoflife
In biology, weβre still busy naming T cells and debating EMT or autophagy β a bit like arguing over bird names while the real wonder lies in understanding how they fly.
#complexsystem #PhysicsOfLife #sysbio
Dear developmental biologists, Julia comes with a Zygote that auto-differentiates. π
using Zygote
f(x) = x^2 + 3x + sin(x)
f'(2.0) # returns 6.58385
#Julialang #mathbio #qBio #compbio #sysbio #systemsbiology
Wet lab? Dry lab? I prefer the Symbolic lab.
Math-Bio isn't just HPC runsβ derivations & proofs matter too. As always, Julia helps.
using Symbolics
@variables x y a b c d m n
f = [a/(1+y^n)-b*x, c/(1+x^m)-d*y]
J = Symbolics.jacobian(f,[x,y])
#Julialang #mathbio #sysbio
Calling any large, well-organised dataset "Systems Biology" is a bit like calling a census "social theory." Essential, powerful, and impressive β yes. But the explanations, through generalised theories/models, still have to be earned. #systemsbiology #sysbio #physicsoflife
Does a cell have a 'mind' - say a proto-mind or basal cognition? Although it was once a fringe idea, recent experimental and mathematical works are accumulating in its support. Here is an interesting recent work: https://t.co/OUW7sxFT6B #complexsystem #systemsbiology #sysbio
Teaching Gillespie algorithm in the Systems Biology class and it reminds that Life is a process with long stretches of exponential calm punctuated by bursts of stochastic drama.
#stochastic
#random
#mathbio
#systemsbiology
#sysbio
I left wet-lab experiments 'cause those are damn slow! Equations are better; they evolve faster than organisms. π#mathbio #systemsbiology #sysbio #qbio #computaionalbiology
The key next step: trust.
What validation loop would make you ship agent-built workflows (benchmarks, literature agents, or lab-in-the-loop)?
#AgenticAI #SysBio #DrugDiscovery
π§ͺ Could digital modeling redefine how we grow CHO cells for biologics?
π Wheels turning: CHO cell modeling moves into a digital biomanufacturing era. @CSB_Journal, DOI: https://t.co/qHqBniQOB6
π CSBJ: https://t.co/lplHGRkyx7
#Biomanufacturing #CHOCells #DigitalTwin #SysBio

Get a glimpse into the future of evolutionary inference! The #SYSBIO Virtual Issue on Machine Learning & New Algorithms highlights the techniques enabling researchers to analyze bigger datasets & more complex scenarios than ever before.
Read today: https://t.co/mp88GJyQN4

Get a glimpse into the future of evolutionary inference! The #SYSBIO Virtual Issue on Machine Learning & New Algorithms highlights the techniques enabling researchers to analyze bigger datasets & more complex scenarios than ever before.
Discover more: https://t.co/7SgVNsYoW9

How are machine learning and deep learning reshaping #EvolutionaryBiology? From phylodynamics & species delimitation to diversification studies, see cutting-edge applications in the new #SYSBIO Virtual Issue: https://t.co/8ksNKr9FT8

Driven by massive NGS data & biodiversity databases, evolutionary biology needs new tools. #SYSBIO's latest Virtual Issue highlights sophisticated approaches like ML, PPLs & online phylogenetics tackling these challenges.
Discover the future: https://t.co/jYWYPNO72O

Can a bacterial culture learn like a neural network?
We turned E. coli into a physical reservoir computer βno genetic engineering, no circuits.
𧬠Now on bioRxiv: https://t.co/GcecBdfRdj
#biocomputing #machinelearning #syntheticbiology #neuromorphic #synbio #ML #sysbio

Systems Biology of Single Cells!
Let's go! #sysbio
Adam MacLean has led the organization of a beautiful program!!!

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