Top Tweets for #ldlink
Great tweetorial by @charles_breeze on the release of #FORGEdb, a new tool to study #regulatory genetic variants. The paper is online at @GenomeBiology. FORGEdb scores are available in select #LDlink (https://t.co/q27mfh7jy6) modules. @NCIEpiTraining
https://t.co/cel6cqy8j1
𧬠Our #ENCODE4 paper is out now @GenomeBiology! Dissecting uncharted regions in our DNA and their influence on our health. π§¬
Dive into the world of disease genetics and genomic "dark matter" with us as we explore our trailblazing new method. Ready? Letβs go! π 𧡠#Genomics #GenomeFunction #ScienceTwitter
https://t.co/TPDujkJJf3 1/
Notice to all #LDlink users:
LDlink has migrated to a new url: https://t.co/EP9nAmuHpC. The old .nci.nih.gov domain will redirect to the new url until further notice. All your favorite #LD tools, plots and downloads will work as before.
@NCIEpiTraining @1000genomes @theNCI @NIH
Terrific work by @charles_breeze annotating potential functional relevance of germline variants. Thrilled to have FORGEdb scores integrated into #LDlink output.
https://t.co/iZnQ92bzuC
@NCIEpiTraining #GWAS #germline #susceptibility #genomics
Update: Are you studying #genomic variants and looking for a method that provides #eQTL, #chromatin looping, #epigenetic mark, #TF binding sites, and other data? 𧬠Let's dive in! https://t.co/92fTamNyoE
LDlink update: Use of #LDlink has substantially expanded and at times exceeded our ability to keep up with demand. I am beyond thrilled to announce implementation of a #serverless architecture for improved performance, reliability, and scalability.
https://t.co/kJwolPlW9m
LDexpress is live! Seamlessly integrate population-specific linkage disequilibrium data from @1000genomes and tissue-specific expression data from @GTExPortal to explore regional genetic variation impacting gene expression.
#LDlink @SHUHONGLIN @NCIDataSci
https://t.co/JuDHxowaQu
Kudos to Yi Zhang from the @XShirleyLiu group for creating a very nice video tutorial for using #LDlink!
https://t.co/CEB8q9w8gd
Online today in @CR_AACR is our paper on #LDtrait, a new #LDlink tool for identifying published phenotype associations in linkage disequilibrium
https://t.co/inUhvLDgSS
@SHUHONGLIN @DerekWBrown_1 #NCI_ITEB @NCIEpiTraining
@mitchiela @NCIEpiTraining Nothing can slow down our use of #LDLinkπ! Thanks @mitchiela, @NCIEpiTraining
Introducing #LDtrait, our new #LDlink web tool
to search if a list of variants (or variants in LD with those variants) have previously been associated with a trait or disease.
https://t.co/0K3U2wKg1X
@NCIEpiTraining @GWASCatalog @1000genomes
Our LDlinkR paper is online today in @FrontGenetics. LDlinkR is a new R package for rapidly calculating linkage disequilibrium statistics in diverse populations. Great work @tim_myers!
https://t.co/M1YHFPFeTh
#NCI_ITEB #rstats #LDlink #LDlinkR @NCIEpiTraining
Happy to announce our R package for accessing @1000genomes linkage disequilibrium estimates through the #LDlink API is now online! Check out #LDlinkR on CRAN: https://t.co/UGW7M0tCh9 #rstats #GWAS #NCI_ITEB @tim_myers @NCIEpiTraining
Happy to announce our R package for accessing @1000genomes linkage disequilibrium estimates through the #LDlink API is now online! Check out #LDlinkR on CRAN: https://t.co/UGW7M0tCh9 #rstats #GWAS #NCI_ITEB @tim_myers @NCIEpiTraining
Thrilled to publicly release #LDpop, our new #LDlink online tool for visualizing variant allele frequency and #LD patterns by @1000genomes population group https://t.co/GsQznUSVdG #NCI_ITEB @NCIEpiTraining
LDlink3.0 is live! Interactively explore association results and access LDlink from the command line https://t.co/l5aECnZlv3 #ldlink
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