Top Tweets for #snATAC
๐ Our new paper dropped today in @NatureComms! "Lifelong single-cell profiling of cranial neural crest diversification in zebrafish" with @PeterFabianLab @TedTsengLab @MathiThiru95 @clairearataphd @CrumpLab #scrna #snatac #devbio #stemcells #zebrafish https://t.co/p2cf6DVYHO
Fresh! An officially โญ๏ธlifelong journeyโญ๏ธ of neural crest cell of zebrafish ๐ with @PeterFabianLab @MathiThiru95 @clairearataphd @smeetonlab @CrumpLab @NatureComms #scrna #snatac #bioinformatic #devbio #zebrafish #crestcell
https://t.co/AFRTw6cx9u
Single-cell profiling of histone modifications in the mouse brain
#CutandTag #snATAC @10xGenomics
Kudos to the team that beat me in the 'race' to implement this.
@shomgoel this is what we were going to do.
https://t.co/wMOpAYlf89
#snATAC peeps...does anybody knows for sure whether the Pol enzyme(s) used for gap filling after tagmentation must have strand displacement (sd) activity? I've seen papers using various Pol enzymes, some of them known for not having sd activity.
The question to ask is what would Chuck Norris do with the new @10xGenomics' #snATAC + #snRNASeq application? #singlecell #multiome
@biorxiv_genomic Cool work led by Peter Orchard and Nandini Manickam - check out those muscle #snATAC profiles!
Proud to share exciting work led by by @raivivek_ and @danqAI on studying #singlecell #chromatin accessibility using #snATAC in pancreatic islets: https://t.co/yFx9akCi2h. We profiled >1,600 nuclei with sci-ATAC-seq to discover cell-specific #generegulation signatures
Hereโs the protocol I used which is different to 10xโs: https://t.co/iMr9VRA3xu #scQA #scQA #snATAC #singlecell #FANS
Today is the day when start pushing the limits...17 very small solid tumour biopsies to be run on both #snRNA and #snATAC on @10xGenomics using Van Helsing.
Hereโs the protocol I used which is different to 10xโs: https://t.co/iMr9VRA3xu #scQA #scQA #snATAC #singlecell #FANS
#scQC #scQA Feb10/2020 #singlecell Q&A Forum (w/ @hoheyn and @LGMartelotto)
THIS WEEK: we would like to focus on your collective experience with different sc-platforms including but not limited to #Chromium (@10xGenomics), #InDrop (@1CellBio), #Tapestri (@MissionBio)...
Have you got questions and/or experience to share on #sampleprep for #snATAC-seq? didnโt forget to share down below! #scQA #scQC forum
Dear #singlecell global team (#scGT), it was a very inspiring week for #scQA. @hoheyn and I would like to THANK to the @cmcginnisUCSF for his comprehensive Tweetorial on #MultiSeq.
For the Feb3/2020 #scQA/#scQC Forum (w/@hoheyn &
@LGMartelotto) we'll discuss some #snATAC-Seq!
Today is the day...finally running NoDye vs. DAPI vs. DRAQ-7 vs. 7-AAD vs. PI vs. SYTO RNASelect for FANS when running #snATAC-Seq on @10xGenomics workflow. Objective: what dye alters the chromatin the least.
Dear #singlecell global team (#scGT), it was a very inspiring week for #scQA. @hoheyn and I would like to THANK to the @cmcginnisUCSF for his comprehensive Tweetorial on #MultiSeq.
For the Feb3/2020 #scQA/#scQC Forum (w/@hoheyn &
@LGMartelotto) we'll discuss some #snATAC-Seq!
Happy new year #singlecell tweeps...stay tuned cus on Monday 6, 2020...#scQA forum for sample prep and data generation will formally start! ๐ค Get ready to share your experience! @hoheyn #scRNA #sampleprep #snRNA #snATAC
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