Josh L. Espinoza

Machine learning . Bioinformatics . Nature

[Josh L. Espinoza @jolespin]

@miangoar VEBA for genome resolved (pan)metagenomics and metatranscriptomics that can handle prokaryotes, viruses, and eukaryotes (https://t.co/vMV3Dh31rL)

[Josh L. Espinoza @jolespin]

@metagenomics just released a modular metagenomics/metatranscriptomics software suite designed specifically for recovering/analyzing prokaryotes, (micro)eukaryotes, and viruses from a genome-resolved perspective: https://t.co/VkpEwoV9f5

[Josh L. Espinoza @jolespin]

@guyleonard Thanks for the post!!! Glad to finally get this publication reviewed and out in the public.

[Josh L. Espinoza @jolespin]

@clairekiechel @_ZackLarsen Ki-Adi-Mundi would been cool to stick with the birth year from
Legends at 93 BBY.

https://t.co/c9uUGjNdRX

[Josh L. Espinoza @jolespin]

@KevinKaichuang @jeffruffolo @AadyotB @MartinPacesa @alexjmeeske @thisismadani What paper is the from?

[bioRxiv Bioinfo @biorxiv_bioinfo]

Unveiling the Microbial Realm with VEBA 2.0: A modular bioinformatics suite for end-to-end genome-resolved prokaryotic, ... https://t.co/x30LMRHRAZ #biorxiv_bioinfo

[Josh L. Espinoza @jolespin]

@thesteinegger Congrats! Very fortunate to be able to use your incredible software in my research.

[NewAtlantis @NewAtlantisDAO]

We’re so excited to have NewAtlantis Labs science team member, @jolespin, on our Twitter Space next week to talk about the software suite he developed, VEBA. VEBA’s (Viral Eukaryotic Bacterial Archaeal) mission is to make robust (meta-)genomics/transcriptomics analysis effortless.

#metagenomics #transcriptomics

https://t.co/awceg2tACt

[J. Craig Venter Institute @JCVenterInst]

The software suite allows for the in silico recovery of microorganisms from all domains of life by integrating cutting edge algorithms in novel ways. https://t.co/KEeq73J8tL

[Josh L. Espinoza @jolespin]

@makeupaguy @makeupaguy you copied my idea bruh. I already made a subreddit for this 3 years ago: https://t.co/z58Zm12SxX

[Josh L. Espinoza @jolespin]

@AstroAma I went from stem cell biology (BSc), then went to ncRNA, then went into bioinformatics emphasis in synthetic biology (MSc), now I study machine learning in microbial ecology (PhD). I've bounced around quite a bit finding out what I like, what I'm good at, and what's needed

[Josh L. Espinoza @jolespin]

@linsalrob Are these Fast5 files?

[PLOS Comp Biol @PLOSCompBiol]

Are you interested in #AntimicrobialResistance? Read this new article from Espinoza, Dupont et al. https://t.co/wuO5dVOqpA

[Josh L. Espinoza @jolespin]

@VaroBank
what has happened to your customer service? It is almost non-existent taking about a week to respond to an e-mail and having your phone lines on hold for over an hour? For a bank that prides itself on being online-only you provide very poor support. #varo #varobank

[Josh L. Espinoza @jolespin]

@TheAtlantic @emmaogreen Isn’t that some antichrist ish?

[Blooshier @Blooshier]

How's everyone's work day going?

[Josh L. Espinoza @jolespin]

@TIME Faucet

[Josh L. Espinoza @jolespin]

@reillycoopersci @AstrobioMike When going the MAG route, how are proteins predicted?

[Josh L. Espinoza @jolespin]

@NPR How about 2 separate rooms?