Jonathan Thorsen

Jonathan Thorsen, MD PhD
Clinical microbiome scientist
Senior Researcher @Copsac_com
Prev. @UCPH_BRIDGE @metabolcenter @microbiomix

[Jens Walter @JensWalter15]

For somebody working on the gut #microbiome, the responses ("gross", "embarrassment", "pseudoscience", etc.) to this @Nature article on the treatment of C-section babies with their mother’s poo are quite sobering. So, I thought I would provide a perspective in the thread below.

[Kim-Anh Lê Cao 🦋@mixomics.org @mixOmics_team]

Our online mixOmics workshop starts on Oct 21. It is self-paced with 4 live webinars, and we provide advice to analyse your own data.
You will learn about data exploration and omics data integration techniques! See 👇 https://t.co/mDHXBmUt3w
@MelbIntGen

#omics #Rstats

[Jonathan Thorsen @Jonathanthdk]

@AmyDWillis Looks like a great set of features, thanks for sharing! Since they're jointly modeled, should each taxon be interpreted as adjusted for all others?

[Jonathan Thorsen @Jonathanthdk]

@LehtimakiJenni @ERC_Research Fantastic! So happy to see you succeed and so well deserved! Will follow your work in the coming years with great interest!

[Jonathan Thorsen @Jonathanthdk]

Lovely to come back from holiday and see this published, led by the great Trine Zachariasen. MAGinator is a wonderful resource helping unify taxonomy and functions in the analysis of metagenomes. Oh and the stuff Gisle said 👇
Now a @COPSAC_com default!
Thanks all contributors!

[Gisle Vestergaard @gisleDK]

Trine Zachariasen made this masterpiece during her PhD. Go check it out!
MAGinator provides de novo identification of subspecies-level microbes and accurate abundance estimates of MAGs.
Code and cluster setup using Conda and Snakemake on Github
https://t.co/p0jkOrS4IP

[Gisle Vestergaard @gisleDK]

Trine Zachariasen made this masterpiece during her PhD. Go check it out!
MAGinator provides de novo identification of subspecies-level microbes and accurate abundance estimates of MAGs.
Code and cluster setup using Conda and Snakemake on Github
https://t.co/p0jkOrS4IP

[DK Frie Forsk.fond @DFF_raad]

UGENS FORSKER: ”Jeg vil gerne forstå den rolle, som bakterier spiller for børneastma – særligt hos de små børn"🦠🩺

Sådan siger @Jonathanthdk fra @HerlevGentofte, der undersøger børneastma i målet om bedre forebyggelse og behandling af sygdommen.

https://t.co/ZN02LrYeF7

[Qian Cheng @sgqcheng]

.@microUCPH @Jonathanthdk @stokholm_jakob @COPSAC_com present MAGinator, a tool that enables accurate profiling of microbiomes with strain-level information. #BiotechNatureComms @NatureComms
https://t.co/21w7d1KAvy

[Turvey lab @TurveyLab]

📢📢We are hiring📢📢
Looking for a senior post-doc/research associate with expertise in #immunology to lead our team in unravelling new human inborn errors of immunity. Our lab is in beautiful Vancouver 🇨🇦. Full details here: https://t.co/TNRXA8Idrn
@UBCMicroImmuno @UBC

[Jonathan Thorsen @Jonathanthdk]

Help me find the right person!

We are looking for a PhD student @COPSAC_com to explore the airway microbiome in childhood asthma. Great project, fantastic place to work & learn.

Please share with anyone who might be interested. Questions? DM me!

Thanks!
https://t.co/QayHhWqxXy

[Gabriele Berg @GBerg_ubt]

We are hiring! Please consider this unique postion in planning your career @tugraz

[Anna Hammerich Thysen ☘ @anna_thysen]

I am looking for a #postdoc.

Come join if you are curious about #type2 #immune regulation in #lung versus #brain.

https://t.co/LK34FTMel9

[HEDIMED @HEDIMED2020]

Save the date and register for the upcoming webinar:

"Maternal inflammation during pregnancy and risk of immune-mediated diseases in birth cohorts"

Tuesday, April 9, at 13:00 BST / 14:00 CEST

https://t.co/Q3BjVOl4dD

@Jonathanthdk @HEDIMED2020 @COPSAC_com @EUScienceInnov

[Jonathan Thorsen @Jonathanthdk]

@TurveyLab @CHILDSTUDY @NatureComms @GenomeBC @GenomeCanada @UBCmedicine @UBCPediatrics @AllerGen_Inc Congratulations! So well deserved!

[CHILD Cohort Study @CHILDSTUDY]

Thanks to guests @nic_timpson of @CO90s (UK) 🇬🇧, @Melissa_Wake of @GenV_for_kids (Australia) 🇦🇺, @stokholm_jakob & @KlausBonnelykke of @COPSAC_com (Denmark) 🇩🇰 for sharing their incredible experiences with #birthcohorts at the CHILD @sickkids symposium!

https://t.co/ovUYx2fhwp

[Sylvain Moineau @smoineau]

We wrote a grant in 2015, got funded in 2016 (JPIHDHL/Europe, DAHES/Denmark, INRAE/France, #CIHR/Canada), then a team of great scientists elevated this initiative to a new high. Extra funding led to this👇Huge congrats to the EarlyVir Team!
#phage #COPSAC
https://t.co/E0e6Q4i6Nt

[Talking CRISPR @TCrispr]

The baby #phage #asthma story is on the front page of https://t.co/UDFc4j6zYN now

[Jakob Stokholm @stokholm_jakob]

So exited to share our newest paper in @NatureMedicine, where we link early life gut virome with later asthma.

Specific compositions of temperate phages drive the association independently from their bacterial counterpart and interacts with host genetics.
https://t.co/80dI2iNdTt

[Jonathan Thorsen @Jonathanthdk]

(EN) https://t.co/nJ7KMwm1Cj

Read more about Sapere Aude and the other cool projects & researchers supported:
(DK) https://t.co/McIh2tGdFV
(EN) https://t.co/tUO87QrQa2
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[Jonathan Thorsen @Jonathanthdk]

Thrilled and excited to be recipient of Sapere Aude research leader - the national Danish starting grant.
I owe a lot of thanks to colleagues and collaborators, and of course to @DFF_raad for the support!
Read more: (DK) https://t.co/txcLTsiOup
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