Our human thymus spatial atlas is finally published in @Nature! 🥳
Using a novel common coordinate framework we explored thymic tissue organisation, cell migration trajectories and molecular composition throughout development.
https://t.co/wRrQK4CApw @humancellatlas
🚨Out now in @Nature: Our spatial atlas of the developing thymus https://t.co/oxJEISJNmI
Together with @Teichlab@MarioniLab and Germain lab we present insights into the establishment of the thymic organ structure in pre- and postnatal life through a new spatial mapping approach.
🚨 Job alert!
The @taghon_lab (@ugent 🇧🇪) is looking for a Postdoctoral Researcher in molecular & computational immunology.
Join us to explore immune cell development in the human thymus using single-cell & spatial omics.
🔗 More info here: https://t.co/g9d8FzogU6
#ScienceCareers
I'm beyond excited and super grateful to @FWOVlaanderen for supporting me for another 3 years with a senior postdoc fellowship! 🥳
Stay tuned for cool science on lineage decisions in human T cell development and the role of the thymic microenvironment. 👩🔬💻
@ugent@taghon_lab
✨ New year, new opportunities:
Come join our team for some exciting projects on human γδ T cell development using single cell and spatial multiomics!🧑🔬💻 We're looking for PhD students and postdocs with interest/experience in computational biology. Reach out for more info!
📢 We're hiring!
Are you:
- Looking for a PhD or postdoc position?
- Interested in human γδ T cells?
- Curious about employing single cell and spatial technologies to study their development?
Then apply now to join our lab @ugent!
https://t.co/Tt5Nd3ubCc
https://t.co/WkbP354S84
If you like scRNA-seq, you'll love CITE-seq. 😍Exploring thymocyte development through this multimodal data set has been utterly fascinating and the level of detail captured by RNA & protein is a real game changer. Get a glimpse of it with our shiny app✨
https://t.co/CQHMubcsoH
To make our fantastic CITE-seq data set of postnatal thymocytes accessible to the community, we have launched a shiny web app for interactive exploration. Go check it out! https://t.co/qYM41PqgwF
Moreover, scRNA-seq and Visium spatial data can be found at https://t.co/IhfPWb2gvH
Big shout out to the amazing team behind this collaborative effort! @YayonNadav@kedlian@AndreaJRadtke@teichlab@taghon_lab
Super grateful to have had such creative, talented and generous companions on this insightful journey.
Our human thymus spatial atlas is finally published in @Nature! 🥳
Using a novel common coordinate framework we explored thymic tissue organisation, cell migration trajectories and molecular composition throughout development.
https://t.co/wRrQK4CApw @humancellatlas
🚨Out now in @Nature: Our spatial atlas of the developing thymus https://t.co/oxJEISJNmI
Together with @Teichlab@MarioniLab and Germain lab we present insights into the establishment of the thymic organ structure in pre- and postnatal life through a new spatial mapping approach.
Congratulations to this year’s CBTH Scholars! Throughout the program, scholars explored a range of topics and were guided by mentors to elevate their projects to new heights. In addition to advancing their own research, they delved deeper into these key areas:
👉 Bayesian Statistics
️👉 Science Communication
👉 Multi-Layered Data Integration
👉 Data Visualization
👉 Proteomics
👉 Epigenetics
Would you like to join our next cohort? This free program will open for applications in June 2025! Don’t miss out on this amazing opportunity to elevate your skills in Computational Biology.
Porto with the best colleagues 🤗 Truly fascinating talks and posters at #ThymE24 and amazing to see all the different takes on our favourite organ.
@Malyamooo @VhJolien
Big thank you to @EBItraining@EHA_Hematology for selecting me for this year's #CBTH cohort! Had a great time at the first workshop - many inspiring conversations and lots of ideas to take on board for the upcoming months of data analysis. 🧑💻
A big thank you to everyone involved in this week's joint @EBItraining and @EHA_Hematology computational biology training in hematology (CBTH) course.
2025 applications are now open if you want to be in the next cohort of early-career researchers: https://t.co/WM6juTqJBa
4 days of #EMBOMultiOmics have been incredibly inspiring, enlightening and fun (!). Returning home with so many new ideas - can't wait to dive back into my data. Thanks to all the fantastic trainers and other participants for the discussions and suggestions 🤗 @EMBLEvents
Congrats to our PhD student Michaela for winning the @BDBiosciences @SING_Gent abstract competition! We're super excited to use the #BDRhapsody system to study the role of GATA3 mutations in the development of T-ALL. #singlecell#ugent
📢Our new preprint is out: We built a spatial atlas of the developing human thymus based on a continuous organ axis.
Fantastic collaboration with the labs of Sarah Teichmann @sangerinstitute & Ron Germain @NIH & proud of @YayonNadav@kedlian@AndreaJRadtke for making this happen.
Happy to share our work, a comprehensive single cell & spatial atlas of the human thymus, which uses our newly established common coordinate framework for the thymus, the Cortico-Medullary Axis (CMA), to spatially explore thymic development.#ThymusCCF https://t.co/4PS1MzCRkf
Our atlas harbours a vast collection of thymus data sets: scRNA-seq, spatial transcriptomics, multiplex protein imaging and - my personal favourite - 143-plex CITE-seq data, which which allowed us to annotate paediatric thymocytes at unprecedented resolution. 🤩
@taghon_t @ugent