Minh Duc Cao

Head of Data Science at TandemAI

[Minh Duc Cao @minhduc_cao]

When you tell a joke about mutations, if it is non-sense it must stop.

[Oxford Nanopore @nanopore]

Today @taniapsduarte from the Institute for Molecular Bioscience will be speaking about 'Deep Sequencing of Microbial Communities in Cystic Fibrosis Airways' at the ASM meeting 2019, Australia. Find out about our bursaries here: https://t.co/t5DvKqD6mn #metagenomics

[Lachlan Coin @lachlanjmc]

.@DevikaGanes showing distribution of tandem repeats in human genome. Short read approaches have focused on STRs #UQwinterschool

[Minh Duc Cao @minhduc_cao]

@ljcoin @DevikaGanes @shoangnguyen @Miranda_E_Pitt @taniapsduarte @c1zhou @joshuahjlee @HeavensTeng @HaojingShao @mbhall88 @actually_alan @APrasetyoputri @ArnoldBaino @xujun_jon @Rhi_Bolton @sanjaya_kc It was an honour working with you. Truly appreciate your great mentorship and immense support, and look forward to your great things come out from you. All the best in Melbourne!

[Devika Ganesamoorthy @DevikaGanes]

Our work on targeted sequencing of tandem repeats using @nanopore and @PacBio is on @biorxivpreprint https://t.co/wUbjreR2ps

[Andrew Carroll @acarroll_ATG]

@allenday @nanopore @googlecloud @ApacheBeam Very cool. Nice visualizations. Interesting demonstration of something you could use in the field and get back a report without ever going back to a lab.

[Minh Duc Cao @minhduc_cao]

@shoangnguyen Awesome, am really proud of the your great work, and look forward to a writing up of this :)

[Minh Duc Cao @minhduc_cao]

Really cool tool for real-time scaffolding and awsome visualization released by @shoangnguyen https://t.co/Xz9xQ0DF8r. Well done!

[Minh Duc Cao @minhduc_cao]

Congrats to Drs. @Miranda_E_Pitt , @HaojingShao and @joshuahjlee graduating from Prof. @lachlancoin incubator. Well done all!!

[Son Hoang Nguyen @shoangnguyen]

Congrats again, Professor X @lachlancoin with his Xmen first class @Miranda_E_Pitt , @HaojingShao and @joshuahjlee !!! Go save the world 🤣🤣🤣

[Minh Duc Cao @minhduc_cao]

@torstenseemann @abacbs Congratulations @torstenseemann on the very well deserved award!

[Minh Duc Cao @minhduc_cao]

@Miranda_E_Pitt @IMBatUQ Congratulations, Dr. Pitt!

[Minh Duc Cao @minhduc_cao]

@Quan_Nguyen_UQ @jyang1981 @drjosephpowell @arc_gov_au Congrats on the well deserved recognition @Quan_Nguyen_UQ!

[Heng Li @lh3lh3]

I am likely to start my lab in October in the department of Biostatistics & Computational Biology (chaired by @rafalab) at Dana-Farber. I am looking for a couple of postdocs in bioinformatics, genomics and related fields.

[Dr Miranda Pitt @Miranda_E_Pitt]

Absolutely thrilled to be presenting our work using MinION direct RNA sequencing to interrogate the XDR K. pneumoniae resistome. @lachlancoin, @shoangnguyen, @taniapsduarte, @mark_blaskovich. Thanks @taniapsduarte for filming this video!!! https://t.co/yQaFgUOHCX

[Dr Miranda Pitt @Miranda_E_Pitt]

Our new preprint: “Octapeptin C4 Induces Less Resistance and Novel Mutations in an Epidemic Carbapenemase-producing Klebsiella pneumoniae ST258 Clinical Isolate Compared to Polymyxins” :) https://t.co/fIUpRdqV1G

[Lachlan Coin @lachlanjmc]

Paper out today in @GigaScience : Chiron: Translating nanopore raw signal directly into nucleotide sequence using deep learning from @HeavensTeng @minhduc_cao @mbhall88 @taniapsduarte https://t.co/0oHM4Izf2w

[Lachlan Coin @lachlanjmc]

Its been a long time coming, but here is our tool for rapid sCNA detection from circulating tumour DNA using a single reference: https://t.co/z2Z4q5prxn

[Lachlan Coin @lachlanjmc]

Excited to present a talk on hexaploid sweetpotato at my alma mater ANU today, 20 years after i last gave a talk here! Thanks @schwessinger for invite!

[Karel Břinda @KarelBrinda]

Our preprint about Ococo, an online consensus caller, is out: https://t.co/Q2wPCQDrXe (w/@val_boeva).
To the best of our knowledge, Ococo is the first caller that can input *unsorted* alignments from a SAM/BAM stream. You don't even have to store them on a disk.

[Mari Miyamoto @marimiya_tky]

Next is Haotien, "streaming base caller". #nanoporeqld