Peter Audano

Programming and Bioinformatics PhD. Interested in engineering data solutions to solve problems in genomics and health.

[Peter Audano @peteraudano]

The Beck Lab is hiring a postdoc to study structural variation in mammalian genomes.

https://t.co/e072NmFGON

[Peter Audano @peteraudano]

@infoecho I think Calvin nailed it, although it's still harder to see the major structural alleles that span multiple nodes.

[Peter Audano @peteraudano]

@zevkronenberg Congrats!

[Peter Audano @peteraudano]

Diverse mice sequenced with long reads identifies structural variation across substrains and chromatin remodeling by transposable elements. https://t.co/Mm1j9L68HA

[Peter Audano @peteraudano]

PAV is now containerized and available on Dockerhub (becklab/pav) and the Singularity container lib (library://becklab/pav/pav). https://t.co/g9OIZ7cBR2

[Peter Audano @peteraudano]

Inversions with Strand-seq + long reads, recurrence, and disease associations, and community resource. Congrats @PorubskyDavid , @HopsWolfram , and Hufsah Ashraf.
https://t.co/H5uji0SDJa

[Peter Audano @peteraudano]

@danrdanny Evidence that even second-hand Wordle is addictive.

[Peter Audano @peteraudano]

@mjpchaisson I’ve been getting cramps in the intercostal muscles for years causing significant chest pain. Still happens with stress, caffeine, and lack of sleep. I think it’s pretty common, but scared me when it started happening.

[Peter Audano @peteraudano]

Way to go mRNA vaccines! https://t.co/Ng09T1KLwL

[Peter Audano @peteraudano]

I am presenting today at #ASHG21 (10:45 ET). PAV: Long-read variant detection including SVs, small variants, and cryptic inversions. We, #HGSVC, are generating high-quality phased genomes to resolve variants and structure inaccessible until now.

https://t.co/B3cDi6rK4B

[Peter Audano @peteraudano]

Clinical long-read sequencing, one step closer to seeing what we are missing in real disease cases. Thanks @danrdanny ! https://t.co/1xfV57nhm7

[Peter Audano @peteraudano]

On this day in 1681, The Duke of Albemarle founds boxing putting his butler and butcher up to a fight, Charles II gives Pennsylvania to William Penn, Mehmed IV rules the Ottoman empire, and Bjarne Stroustup invents C++.

[Mitchell R. Vollger @mrvollger]

Excited to finally share: Segmental duplications and their variation in a complete human genome! This is a product of an awesome collaboration in the T2T consortium and I am thrilled to be sharing the SD side of this story. https://t.co/1jAqkheNba

[Glennis Logsdon @glennis_logsdon]

This is truly amazing work that will have broad impacts on the way we sequence, assemble, and analyze genomes in the future. Happy to have been a part of it!

[Peter Audano @peteraudano]

@mrvollger @xavster838 Congrats! You worked for that, well deserved.

[Jan Korbel @JanKorbel5]

De novo assembly of 64 haplotype-resolved human genomes of diverse ancestry and integrated analysis of structural variation https://t.co/Ux7t32G5Bq

[Mark Chaisson @mjpchaisson]

lra is in bioconda!

[Tobias Marschall @tobiasmarschal]

Strand-seq+HiFi = haplotype-resolved assemblies of single samples (ie. no parents data), N50>25Mbp, QV>40 (checked from BACs). Big thanks to an awesome team of co-authors: David Porubsky, Peter Ebert, @peteraudano, @mrvollger, @EichlerEE, and many more...

[Michael Schatz @mike_schatz]

@aphillippy @khmiga Excited to hear @aphillippy publicly share the details of the first T2T assembly for the first time! @HumanPangenome #t2thprc

[Adam Phillippy @aphillippy]

The Telomere-to-Telomere consortium is proud to announce our v1.0 release of a complete human genome. When @khmiga asked me to team up on this a few years ago, I wasn't sure it would be possible. Now down to just 5 gaps. What a journey! Read more here https://t.co/OrtRB0eSpc