Wen Hu

Instructor @WeillCornell. Big-fan of cat, manga, Takarazuka, art, and crime/sci-fi shows.

[Wen Hu @rainryuhei_wen]

Our ScISOr-ATAC paper is out!

[Nature Biotechnology @NatureBiotech]

Combined single-cell profiling of chromatin–transcriptome and splicing across brain cell types, regions and disease state https://t.co/XqwqTIKphP

[Hagen Tilgner / @[email protected] @hagentilgner]

Our #BICCN paper is out at @NatureNeuro
Led by @noush_joglekar+@rainryuhei_wen. Single-cell isoforms across brain regions,development&species.
https://t.co/mB8MZvXkG7
#LongRead #RNA @iRnaCosi #nanopore #pacbio #genomics #Transcripomics
#RNAseq #Splicing Thank you @ElisaFlo04 !

[Wen Hu @rainryuhei_wen]

takarazuka tour again!

[Wen Hu @rainryuhei_wen]

Atami day

[Wen Hu @rainryuhei_wen]

@LightfootLab I didn’t know you wear eye contacts before, news to me! I’m good, just non-stop for some time, will have a vocation back home (first time in 4 years) soon. Will you have any plan for a US meeting soon? I registered for sfn, wondering if I can meet you there Dr. Lightfoot😆

[Wen Hu @rainryuhei_wen]

@LightfootLab glasses?!

[Wen Hu @rainryuhei_wen]

Now we have both Signac and Seurat!

[Wen Hu @rainryuhei_wen]

Great job Noush and Hagen!

[Anoushka @noush_joglekar]

I'm so excited to FINALLY present the latest preprint from the @hagentilgner lab where we look at alternative splicing in the brain across "space and time" https://t.co/Mfx95oEE95

[Hagen Tilgner / @[email protected] @hagentilgner]

Andrey & Alla put out the newest version of Isoquant
(https://t.co/2bmd5K0pvi); Results unchanged but memory usage down ~10-15 fold and disk usage down ~5-fold;
https://t.co/bdBxlZttdf
#LongRead #RNA @iRnaCosi
#nanopore #pacbio #genomics
#Transcripomics #RNAseq #Splicing

[Hagen Tilgner / @[email protected] @hagentilgner]

Our preprint on single-cell long-read isoforms across mouse brain regions, developmental time points as well as human hippocampi is here:
https://t.co/SnCXlXR3vp
Great team work with contributions by many but led by @noush_joglekar, who invested almost 3 years into this.

[Hagen Tilgner / @[email protected] @hagentilgner]

Out in @NatureBiotech: What isoforms are really in your @PacBio or @nanopore run? Andrey&Alla (with help by @noush_joglekar, AS, @jjarroux &AL) have precise answers:
https://t.co/2bmd5K0XkQ
#LongRead #RNA @iRnaCosi #nanopore #pacbio #genomics
#Transcripomics #RNAseq #Splicing

[NCT 127 @NCTsmtown_127]

Let's get linked NEWARK!!!💚💚💚

#NCT127 #NCT127inNY #NEWARK #NEOCITY #NEOCITY_THE_LINK
#NEOCITY_THE_LINK_NEWARK
#NCT127_NEOCITY_THE_LINK

[Wen Hu @rainryuhei_wen]

Check our new tool ScisorWiz - show the selfie of your isoforms in each cell! https://t.co/BeOZmXK9Jr

[Wen Hu @rainryuhei_wen]

Highlight of our recent publication🐱
https://t.co/LX2iHEvEks

[Wen Hu @rainryuhei_wen]

Happy to announce our new release on Genome Research🧬 One RNA molecule on two long-read sequencers: https://t.co/F7hhKeAdiF Congrats to Alla, Andrey,@noush_joglekar and @hagentilgner!

[Wen Hu @rainryuhei_wen]

Online!

[Anoushka @noush_joglekar]

I am beyond thrilled to present our work on single-nuclei isoform sequencing (SnISOr-Seq), now out in Nature Biotech https://t.co/rl9UiyTYUv. Thread below ⬇️

[Wen Hu @rainryuhei_wen]

Our new method enables single nuclei isoform RNA sequencing in human brain tissues is released here!
https://t.co/Iief8CK3x8, contributed by @si_hardwick+@noush_joglekar+@rainryuhei_wen+@hagentilgner and our awesome co-authors!

[Wen Hu @rainryuhei_wen]

Our new release is here!

[Anoushka @noush_joglekar]

Thought we'd start off '22 with a fresh serving of science on your timeline! 🧵

TL;DR we developed single-nuclei isoform sequencing in frozen human brain tissue and found some cool stuff: https://t.co/43KkStXF4Z

[Anoushka @noush_joglekar]

Excited to announce the newest preprint from the Tilgner lab - https://t.co/HEhePQugZb

We always knew that splicing is messy, especially at the single cell level, but we found that there's some method to the madness 1/n

[Wen Hu @rainryuhei_wen]

@noush_joglekar Congrats!