Rob Eveleigh

Genome jockey + music jockey.

[Gavin Douglas @gavin_m_douglas]

The PICRUSt2 pre-print is now up on @biorxivpreprint ! @BetaScience https://t.co/UiEUrUsPj0

[brent pedersen @brent_p]

nice to see! duphold (paper out soon) and available here: https://t.co/ZyBcJFL51f improves precision even for long reads.

[Svetlana Gorokhova @SGorokhova]

The fate of missense variants in solo exomes is usually to stay as VUS… not for Dijon team! (Lecoquirre @jamiebdm and Duffourd et al) Public data in denovo-db used in a smart way lead to many neurodev patients obtaining diagnosis. @GIMJournal https://t.co/7iLyOyDTnc

[Ryan Collins @RyanLCollins13]

Careful benchmarking of ~70 different methods for SV detection from human genomes:
https://t.co/a66nPc9qs8

Looks to be an impressively comprehensive and valuable reference to guide future SV discovery efforts.

Thank you to the authors for compiling this study!!

[brent pedersen @brent_p]

we have used GiaB SV truthset in developing smoove and duphold, which, together, reduce the number of false positive SV calls from lumpy 3-fold with ~ 1% loss in recall. this would not be possible without a resource like this.

[Guillaume Bourque @guilbourque]

After years... and years... Our GenPipes paper is finally out! It describes 12 pipelines for various genomics applications. Please take a look and let us know what you think! @C3Genomics https://t.co/1RhQrKBCeL

[Aaron Quinlan @aaronquinlan]

Still pondering this one

[Rob Eveleigh @rob_rollback]

Can-u-DIG-it

[Guillaume Bourque @guilbourque]

CanDIG working meeting! Exciting to talk about our v2 implementation. Our team has grown thanks to support from @CANARIE_Inc @InnovationCA @GenomeCanada @CIHR_IRSC @tfri_research @GA4GH @distribgenomics

[brent pedersen @brent_p]

just found out about this sweet, sweet, precious, downloadable data: https://t.co/7yv3LH6gMd

WGS, BS-Seq, RNA-Seq, targetted RNA from recent illumina platforms for 10 Samples and WGS for 100+!

from Personal Genome Project UK (@PGorg)

[Rob Eveleigh @rob_rollback]

@guilbourque @CedricFeschotte @CGatis Oh the nostalgia of my Dalhousie days. Enjoy Ford's talk.

[Guillaume Bourque @guilbourque]

The ⁦@C3Genomics⁩ team is growing! Here for all your bioinformatics needs. ⁦@GenomeCanada⁩ ⁦@GenomeQuebec⁩ https://t.co/myvq69PZml

[Aaron Quinlan @aaronquinlan]

We've received a few requests for a BED file of our constrained coding regions. @jim_havrilla has put together a github repo with links to an igv.js browser, bed file etc.
Repo: https://t.co/Pbz46vCyek
Manuscript: https://t.co/xALHlp983j

[Guillaume Bourque @guilbourque]

Come work with us in Montreal @C3Genomics! We need: bioinformatician, web developper, HPC specialist https://t.co/DHrrCKCYyt Please RT

[Kyle Griffin @kylegriffin1]

For some international perspective on the Paris Accord, this is from Australia's @theage.

[Compute Canada @ComputeCanada]

6/10 Cedar runs cloud. Using OpenStack, Cedar's massive storage & batch #HPC environment integrates w/ @ComputeCanada cloud system Arbutus

[Guillaume Bourque @guilbourque]

We collected them to distribute them freely! You can find over 10K @IHEC_Epigenomes here: https://t.co/UrYXks45U8 https://t.co/gMSaR1V7W7

[Rob Eveleigh @rob_rollback]

Researchers identify first familially-inherited fusion gene based on RNA-seq data https://t.co/8PpuLZvpMk #bioinformatics #feedly

[McGill University @mcgillu]

Canadians are outliving Americans, in some cases, by as much as a decade. Is public healthcare secret to longevity?
https://t.co/aPa8CamzL4

[Genome Medicine @GenomeMedicine]

CancerLocator: non-invasive diagnosis & classification using methylation profiles of cell-free DNA @GenomeBiology https://t.co/9PUsyIidjt

[Rob Eveleigh @rob_rollback]

Blood test detects cancer and pinpoints location...before symptoms appear https://t.co/aheyo0vDOw via @TelegraphSci