stanislav cherepanov

PhD student in Biophysics at @UMich | @mipt_eng & @UT_Dallas alumnus

[stanislav cherepanov @stancherep]

Today we got approved for NSF SBIR funding 🎉

[stanislav cherepanov @stancherep]

Yesterday I had my first coding interview for a job, and honestly, it was pretty embarrassing. I love coding, but I started panicking and felt so dumb over such a simple question. The funny part is I’ve even taught a Python and there I was, completely blank on a basic algorithm…

[stanislav cherepanov @stancherep]

My friend built a tool for live captions

[Natalia @n_ta_a]

Apple captions were hard to read/missing accuracy, so I ended up building a much better version from scratch using Antigravity + Soniox API

Super helpful for folks who are deaf + multilingual
https://t.co/UHqGgxsO4Y

[stanislav cherepanov @stancherep]

I believe this is closer to truth than you want to think

[Yusuf Papurcu @yusufpapurcu_]

@josephdviviano Same prompt to opus 4.6, then added "point out to the similarities between humans and llms"

[stanislav cherepanov @stancherep]

@BrianRoemmele Interesting

[stanislav cherepanov @stancherep]

SF Feb 21–26 for #BPS2026. Speaking Feb 25 (Computational Biophysics) on constant-pH MD for drug binding - capturing pKa shifts + coupled protonation effects that standard MD misses.

Finishing my PhD this spring/summer. Exploring opportunities in ML / comp chem / drug discovery

[stanislav cherepanov @stancherep]

Been working on CRIMM's solvation & ionization for months 🧬
Finally got it right:
• 6 box geometries with auto-orientation
• SPLIT/SLTCAP for accurate ion concentrations
• Export for standalone (py)CHARMM

pip install crimm ✨
https://t.co/njnTTKx50E
#MolecularDynamics

[stanislav cherepanov @stancherep]

Just want to share that I finally met Stephen Wolfram in person and chatted about cognition, entropy, and whether physics of life is just debugging itself.

My very first science projects were in Mathematica ➗💻 and I’ve been a fan of his books 📚 forever!

[stanislav cherepanov @stancherep]

Thrilled to finally present my research at the Russian-American Science Association conf. at Rutgers 🎉

Topic: How MD helps us understand protein life at different pH 🧪🔬💧

After 3 conferences as a participant, it feels exciting to take the stage and share my work 🚀✨

[stanislav cherepanov @stancherep]

Oh, boy, only If you even knew how common it is in MD codes...

[Michigan Biophysics @UMBiophys]

Last Fall, we tragically lost Professor Kevin Wood.

To honor his legacy, we're raising funds for the Kevin Wood Memorial Graduate Student Fund on #GivingBlueday.

Help continue his passion for student advancement in biophysics.

Contribute on March 19. 💙 https://t.co/aLjxtuGZ4H

[Dr. Shana Adise @ShanaAdise]

PhD programs are pausing admissions to graduate school due to NIH indirect cost cuts. See the growing number of programs here: https://t.co/3j759AlhGL

How is science supposed to advance with fewer trainees, less $ for research? This is devastating.

[stanislav cherepanov @stancherep]

🚀 Excited to share OPRLM - a web tool for simulating proteins in realistic lipid membranes!

✔️ MD-ready for CHARMM, NAMD, GROMACS, OpenMM
✔️ 18 biomembranes & 5 lipid bilayers
✔️ Database of simulation-ready protein-membrane systems

Try it now! 🌍 https://t.co/cILWjAEfP1

[stanislav cherepanov @stancherep]

No wonder my code is running buggy - it has a supervisor! 🤣

[stanislav cherepanov @stancherep]

I recently tried out the new #NotebookLM, and I’m blown away! It’s like having a personal podcast assistant. Reading scientific papers is now a breeze and super engaging, making complex scientific concepts more accessible and interactive!

[Olexandr Isayev 🇺🇦🇺🇸 @olexandr]

AI in drug discovery is like teenage sex: everyone talks about it, nobody really knows how to do it, everyone thinks everyone else is doing it, so everyone claims they are doing it.

[stanislav cherepanov @stancherep]

you know journaling your thoughts helps, but when inspiration wave hits, there’s no time to write. Later, you’re left wondering what you even did...🤯 #PhDLife

[stanislav cherepanov @stancherep]

All my future plans hinge on the dream that one day I’ll wake up with an amazing amount of willpower and drive that I’ve never had before

[Sergey Ovchinnikov @sokrypton]

And this is why code should always be published with papers... This group made an attempt to reproduce AlphaFold3 and found a number of potential issues in the published pseudo-code. See exciting 🧵 👇