BD2K-LINCS DCIC

The BD2K-LINCS DCIC is part of the Big Data to Knowledge (BD2K) NIH initiative, and it is the data coordination center for the NIH Common Fund's LINCS program.

[Ma'ayan Lab @MaayanLab]

Join us on Thur. July 24 @ 2 PM ET for a virtual seminar about ChEA-KG, a newly developed @MaayanLab web-based app that enables users to analyze their gene sets in context of a human gene regulatory network (1559 transcription factors). Please register at https://t.co/oZ7SQR8vjo

[Ma'ayan Lab @MaayanLab]

Join us on Thursday, February 27 at 2:00 PM ET for a virtual seminar featuring ARCHS4, a web resource that streamlines access to over two million uniformly aligned RNA-seq samples from GEO. Please register in advance: https://t.co/zFA2YA2Fy3

[Ma'ayan Lab @MaayanLab]

Join us on Thursday, January 23 at 2:00 PM ET for a virtual seminar featuring GeneSetCart, a web application for multi-omics AI-driven gene set analysis. Please register in advance for this virtual seminar: https://t.co/7zDQisBt7i

[Ma'ayan Lab @MaayanLab]

The Summer Research Training Program in Biomedical Big #DataScience in the @MaayanLab @IcahnMountSinai is accepting applications for summer session 2025! Application deadline is Feb 1. Program details: https://t.co/iSuyEy2V77

[Ma'ayan Lab @MaayanLab]

Join our Virtual Symposium in Big #DataScience on 8/8 @ 10 AM ET where the @Maayanlab trainees in the 2024 Summer Undergraduate Research Training Program in Biomedical Big #DataScience will present their research projects. Register: https://t.co/54kGNJtDtM

[CFDE Workbench @CfdeWorkbench]

Join us on Tuesday, June 25th at 1:00 PM ET for a virtual workshop introducing the Playbook Workflow Builder: https://t.co/WCYBgHh37V, a new #bioinformatics platform to interactively create #workflows with no coding skills. Registration: https://t.co/QwRO3vvE38 #genomics #omics

[Yuval Itan @ItanLab]

A great talk by @AviMaayan and his team on Tuesday at the @SinaiGenetics WIP in Computational Biology and Data Science, showcasing their excellent new bioinformatic interfaces, including Rummagene and others.

[AviMaayan @AviMaayan]

On Friday 5/31 @ 1 PM ET, members of the @CfdeWorkbench will introduce new tools to query the @LINCSProgram L1000 data and gene expression signatures automatically extracted from @NCBI #GEO https://t.co/5AUfjLcOYO register: https://t.co/ppsZpyQozx

[Ma'ayan Lab @MaayanLab]

Summer Research Training Program in Biomedical Big #DataScience in the @MaayanLab @IcahnMountSinai
ACCEPTING APPLICATIONS FOR SUMMER SESSION 2024 | Application deadline Feb 1 https://t.co/iSuyEy2nhz

[AviMaayan @AviMaayan]

Join the @MaayanLab Virtual Symposium 8/10 @ 10 AM ET where our trainees in the Summer Undergraduate Research Training Program in Biomedical Big #DataScience will present their research projects. Register:
https://t.co/BjYEuzMR51 #STEM #Bioinformatics #SystemsBiology #DataMining

[Communications Medicine @CommsMedicine]

💡 NEW RESEARCH @CommsMedicine - Evangelista et al. construct ReproTox-KG, a #toxicology knowledge graph for exploring the link between drugs, genes & structural birth defects | @MaayanLab @AviMaayan @CfdeNih
https://t.co/hRnPzVWiVn

[Icahn School of Medicine at Mount Sinai @IcahnMountSinai]

Data scientists at @IcahnMountSinai and colleagues have created an #ArtificialIntelligence model that may more accurately predict which existing #medicines, not currently classified as harmful, may, in fact, lead to congenital disabilities: https://t.co/aQB25dKcyq

[Ma'ayan Lab @MaayanLab]

Last month we welcomed the 2023 cohort of 12 talented undergraduates into our lab for 10-weeks as part of our Summer Research Training Program in Biomedical Big #DataScience https://t.co/iSuyEy2nhz

[Nature Cardiovascular Research @NatureCVR]

Amadori et al. show that plasma from patients with #atherosclerosis triggers unique inflammatory signaling in PBMNCs, which were used for selecting #drugs that may be repurposed for cardiovascular #immunotherapies|@ChiaraGiannare1 @djama85 @NYULHCVRC https://t.co/Eynh4unffZ

[AviMaayan @AviMaayan]

With this feature, that the @MaayanLab just added to #Enrichr https://t.co/6hB2xJcimf, you can now search for any term, and then download selected gene sets that contain to the search term in their annotation string. #Bioinformatics #Omics #DataMining #BiomedicalResearch #BigData

[NIH Common Fund @NIH_CommonFund]

The Common Fund is seeking applications to funding opportunitites regarding #diversity, #FAIRData, #CloudComputing, and #BiomedicalResearch that make use of publicly available data resources. Check out the current opportunities: https://t.co/qfLcSEGjYN

[Andrea Bauerfeind @mages05]

Talk #IonChannels, #GProtein, #Kinases, #Kinome and #NetworkPharmacology #GPCR & more at the Understudied Druggable Proteome Conf. 6/4-8. #UDPSRC

Abstracts Due: 4/2
Info & Reg: https://t.co/iBerSbRDs4
Students: $150 off
Organizers: Dr. Michael McManus, @HColecraft, @AviMaayan

[mythreye_k @mythreyelab]

I have lately been obsessed with some of the tools created by @AviMaayan @MaayanLab @BD2KLINCSDCIC . Thank you l!!! #opensource #bioinformatics #Enrichr

[AviMaayan @AviMaayan]

In this presentation "Benchmarking Methods to Produce #L1000 Consensus Signatures" https://t.co/Mg1XMXhxPI Sophia Colmenares, an undergrad @Princeton, describes her summer research project with the @MaayanLab @BD2KLINCSDCIC at @IcahnMountSinai. #bioinformatics #STEMeducation

[AviMaayan @AviMaayan]

Learn how Hannah Qu, one of our talented @BD2KLINCSDCIC 2022 summer scholars updated the #ChEA gene set library for #Enrichr https://t.co/R16kYkja9o. You can download the updated library from: https://t.co/SXWa68PfjE Presentation: https://t.co/cbmwa6WDgq @MaayanLab