Denis O'Meally

[Hardip Patel @hardiprpatel]

Pleased to present "genome assembly for the Australian alpine skink Bassiana duperreyi" https://t.co/7DIsMGUBEg . High heterozygosity, centromeric satellites of 187 & 199bp, rDNA at ~15kb. Great resource for sex determination and chromosome evolution in skinks and other lizards

[Max Stammnitz @maxstammnitz.bsky.social @maxi_prep]

Q: What could GO WRONG with a major cancer genomics study in which tumours are sequenced to only 15x depth?

A: An awful LOT! 😟

Our detailed reanalysis now out in @RSocPublishing:
https://t.co/Bblr2tERXp

🧵👇 (1/18)

[Nataly Kravchenko-Balasha lab @BalashaLab]

Happy to share our new paper “Transcriptome free energy can serve as a dynamic patient-specific biomarker in acute myeloid leukemia”. A fantastic collaboration with @rrockne, @lisauechi, @SwethaVasudeva4, and the @cityofhope researchers. @Nature_NPJ
https://t.co/8jhHMlxgCf

[Dr Charlotte Houldcroft @DrCJ_Houldcroft]

Erm, how did Figure 1 get past a peer reviewer?! https://t.co/pAkRmfuVed H/T @aero_anna

[David.Frankhouser @D_Frankhouser]

Out today!

We create a CML potential landscape from time-series whole transcriptome data and use math modeling to predict disease onset and treatment response from a single pre-disease time point.
(1/2)
https://t.co/67oIauZocZ
#scicomm #mathonc @cohmathonc

[Australian Embassy, USA @AusintheUS]

We're honoured to present @DrRebeccaJ with an inaugural Embassy of Australia Award. This trailblazing 🇦🇺 has the coolest job in Washington: Chief Scientist at the Smithsonian @NMNH. She led research into the Koala Genome, and is recognised as a superstar of STEM.
📷 Nick Langley

[Hardip Patel @hardiprpatel]

Exciting opportunity: @NCIG2013 is #hiring #postdoc #ResearchFellow in #pharmacogenomics @ourANU @JCSMR
Apply at https://t.co/2BM1NjiPW2
#AcademicJobs #bioinformatics #genomics
DM for info/questions, generous renumeration, international applicants welcome

[David.Frankhouser @D_Frankhouser]

Check out our latest preprint using stochastic modeling of the full time-series transcriptomes to better understand leukemia! 🧵 below, but first, the three key take-aways:
https://t.co/hSnX9wErNg

[Stefano Mangiola @steman_research]

#JobOpportunity! 💻🧬 at @WEHI_research

- #singlecell Large-data #Analytics
- #SoftwareEngineer
- #HPC

Work with us and @CSL to make the next-generation #singlecell immune-intelligence infrastructure!

🗓️ by 26 Oct

Community, please RT!

https://t.co/J6tQNy610U

[Stefano Mangiola @steman_research]

🎉🧹 The #tidyomics ecosystem is official!

Into #omic data analysis? Spanning #Seurat @Bioconductor #SCE, #SE, #GRanges, #Citometry?
Now, just use #tidyverse !

Co-led with @mikelove and @TonyPapenfuss @WEHI_research #singlecell

The preprint https://t.co/jGEy2BVj5C

[Max Stammnitz @maxstammnitz.bsky.social @maxi_prep]

NOW OUT @ScienceMagazine 🧬🐾🤓

“The evolution of two transmissible cancers in Tasmanian devils”

A 🧵 on our deep DNA sequencing dive into the startling genetic history of contagious tumours (1/n)

👇

https://t.co/XuV9LctJ4f

[Rebecca Johnson @DrRebeccaJ]

Museum collections provide some of the most important data to help us understand and predict what is happening under a changing climate. However, our collections pre-date electronic databases by hundreds of years so how do we know what we have?

[Dr Martina Jelocnik @MartinaJelocnik]

See our collaborative paper where we surveyed for some expected and unexpected #virus #chlamydia #pathogens in our Australian #birds #parrots #pigeons #kingfishers #Raptors
Supported by @arc_gov_au BirdsQueensland @usceduau @wildwarriors @VirusesMDPI
👉🏽https://t.co/BDD6Ku6Pc1

[Francesca Hogi @DearFranny]

Timeline cleanse courtesy of my Pit Bull/German shepherd/Shitzu 🐾🐾❤️

[Denis O'Meally @DenisOMeally]

@DumindaSb @ardynasios @HolleleyClare @j9deakin @MVLizards @joanna_sumner99 Congratulations Dumi!

[Duminda S B Dissanayake @DumindaSb]

It was fantastic to hand over the final copy of my thesis to my primary supervisor. A massive thank to my supervisors and collaborators for everything during this epic journey, with @ardynasios @HolleleyClare @j9deakin @MVLizards @joanna_sumner99 @DenisOMeally

[David.Frankhouser @D_Frankhouser]

Check out our new paper in @ScienceAdvances! We show that the microRNA (miR) transcriptome undergoes a state-transition during AML development. Here's a thread on the main take aways on how we used the state-space to learn about AML.
🧵👇
https://t.co/PqltpHqfr5

[Denis O'Meally @DenisOMeally]

Kinks in chromosomes cause sex in this crazy cute lizard; our new paper in PNAS:
https://t.co/4CKUZEHhoM

[Jenny Graves @ProfJennyGraves]

Specks of dust on the microscope slide? No, we are looking at the building blocks of our genome https://t.co/GroGtvXXfZ via @ConversationEDU

[Prof Carolyn Hogg @HoggCarolyn]

So pleased to publicly release the first 116 koala genomes on @AWS today! Huge effort from our team @KathyBelov @lukesilver20 Konnie, Kim, @ellemclennan & researchers who provided samples! Thanks @Matt_KeanMP @sussanley for funding. @Sydney_Science https://t.co/DDY8Wce5ze