Michael Lab

Todd P Michael @salk, #plant #genomes, #biology, #CircadianRhythm, #genomics

[Michael Lab @GenomesLab]

Happy #420, today we release 22 pairs of high-quality chromosome resolved haploid #Cannabis #genomes (10 USDA lines) available to researchers through GRIN. All assemblies include gene models & repeat annotations @salkinstitute, https://t.co/fESNHNwDky

[Jake @jjminich]

If you do #pangenomes check out this new tool PanKmer led by @ScienceGuyTony from @GenomesLab @salkinstitute really awesome to see this applied to many large datasets across different species so far!! #genomics

[Alex Harkess @aeharkess]

Awesome time at Salk and collecting Welwitschia at @TheHuntington with @jleebensmack @GenomesLab. More sex chromosomes !

[@IAmSciComm - On a Break! @iamscicomm]

A thread about using color as a design tool in science presentations. Color is a great tool to separate different categories of information, to highlight information, or to establish an emotional tone. 🧵1/20

[Michael Lab @GenomesLab]

PhD student @MaliaMoore23 in the lab discussing seagrass! @salkinstitute @Scripps_Ocean

[Jake @jjminich]

Great job @MaliaMoore23 discussing #seagrass #genome and #chemistry @GenomesLab @Scripps_Ocean @salkinstitute

[Michael Lab @GenomesLab]

@mattloose @nanopore May I make a suggestion for the software/gui/viz team? It would be really cool to have a real time tracker for Gb >50kb, Gb >100kb. Seems like an easy add on

[Oxford Nanopore @nanopore]

Kit 14 will allow users to tune their accuracy & output needs by modifying run conditions in the software. Early work has shown 99.6% raw read accuracy can be achieved at 28 degrees. At 34 degrees, 99.3% is possible whilst generating a high yield. Watch: https://t.co/C6xVX76P0h

[Jim Haseloff @jimhaseloff]

Extreme field biology: miniaturised equipment for DNA extraction, sequencing and analysis in the wild
(https://t.co/KvfjsVw6cR)

[Michael Lab @GenomesLab]

@ATJCagan Fantastic work, if you’re interested in looking at fishes, my post doc would be a good resource

[Jake @jjminich]

Lots of great comparative genomics tools on display by ⁦@mike_schatz⁩ —> also great to see a commitment to a deployment of tools to biologists via galaxy⁩ #AGBTAG22 ⁦@agbt⁩

[Jake @jjminich]

Harnessing Plants Initiative: keys to carbon drawdown and storage #AGBTAG22 @salkinstitute @agbt … deep roots, bigger roots, and more recalcitrant carbon rich polymers

[Jake @jjminich]

If you're interested in #wildcaught #fish #microbiomes, check out our @biorxivpreprint: "Fish microbiomes 101: disentangling the rules governing marine fish mucosal microbiomes across 101 species" https://t.co/5DFdZwr5qr

[Jake @jjminich]

Took me about 10 #fish #genomes to get dialed in but finally making some ultra long dna and libraries — latest 83 kb N50 on #promethion @nanopore

[Salk Institute @salkinstitute]

Profs Joseph Noel + Todd Michael are showing how their research will help build a roadmap to preserve & restore wetlands around the world, using native plants that can withstand current and future climate conditions. @SpecNews1SoCal

https://t.co/YFmCKedgyI

[Christie Towers, PhD @ChristieTowers]

Continuing to celebrate #Blackhistorymonth2022 @salkinstitute with @blackatsalk

[PAG-International Plant & Animal Genome Conference @PAGmeeting]

Welcome #PAG attendees! Virtual #PAGXXIX is happening now. Please be patient, as we are still working out the bugs. Virtual PAG XXIX Workshop Sessions Registration is still open at: https://t.co/DsICczzRrP We hope you join us.

[Aaron Quinlan @aaronquinlan]

Postdocs in computational, evolutionary, and disease genetics: apply to be in the Rising Stars in Genetics and Genomics Symposium at the U of Utah (May 11-12). We want to host creative, early career scientists to share their exciting science. https://t.co/X17RgN1Hlu

[Oxford Nanopore @nanopore]

Follow the action at #nanoporeconf @NanoporeConf 🧬

[Rasmus Kirkegaard @kirk3gaard]

Accuracy often gets a lot of attention when talking about the most recent release of @nanopore chemistry. However, I think it is a game changer that now only 5 fmol of DNA is loaded onto the flowcell. For 10 kb DNA fragments that is down to 31 ng!!!