Mari Tolonen

PhD student at @reNEW_Global @cphbiosciphd at @ksedzinski lab, imaging enthusiast, looking for real life easter eggs

[kuba sędziński @ksedzinski]

🧵1/14 Preprint thread! Can we predict a cell’s fate based on its dynamics? 🔮 Our new study unveils a framework for watching development unfold in real-time, revealing how a cell's shape and movement encode info about its future fate. 🔬📄 Preprint: https://t.co/84lDgRTJgc

[Mari Tolonen @MariTolonen]

@ksedzinski @UCPH_health @reNEW_Global Congratulations Kuba, happy to continue working on this exciting topic!

[reNEW @reNEW_Global]

Look at the amazing gallery at reNEW ARTxSCIENCE Competition and help find a winner https://t.co/rXRxyoAwD1
Credits Prof. Frank Staal @StaalLab , LUMC

[bianca dumitrascu @bidumit]

At the end of grad school I got very interested in developmental biology. Years later, here's a product of that interest in the context of connecting spatial transcriptomics with mechanical and morphological properties of single cells. https://t.co/fu20HK1KSQ

[Loïc A. Royer 💻🔬⚗️ @loicaroyer]

🚨 #ChatGPT + @napari_imaging 🚨
Releasing my latest weekend project: Omega, an autonomous LLM agent that writes image processing and analysis code, fixes its mistakes, accesses the napari viewer, makes widgets, & more!
https://t.co/5btZq05ro1
@langchain @OpenAI
#OmegaAgent

[kuba sędziński @ksedzinski]

Don’t forget to apply! Phd and Postdoc positions in cell and tissue mechanics. Please read below for details.

[kuba sędziński @ksedzinski]

📣We are looking for a new Postdoc and Ph.D. student to join our team at @reNEW in the center of #Copenhagen.
Join our team for an exciting opportunity in studying the cell and tissue mechanics of developing embryos through quantitative research! Help us spread the word by RT!

[Zebrafish Rock! @ZebrafishRock]

Cell nuclei movements (color-coded for direction) during early zebrafish development. Credit to Philipp Keller @HHMIJanelia. #ZebrafishZunday

[Laura Wiggins @laura_wiggins13]

⭐️Introducing CellPhe⭐️

Our #opensource, automated toolkit for #cellphenotyping from time-lapse videos

Read the full text here @NatureComms:
https://t.co/atdOszBANP

@WJBrackenbury, @YorkBioimaging, Alice Lord, Killian Murphy, Stuart Lacy and Julie Wilson

@BiologyatYork (1/6)

[Nature Communications @NatureComms]

Multiciliated cell precursors in the Xenopus embryo use filopodia to pull at the vertices of the overlying epithelial sheet
@reNEW_global @ksedzinski @DoostmohammadiL @gbventur @AboutalebAmiri @Raghavan_Thiaga @MariTolonen
https://t.co/qShtm0itfP

[Mari Tolonen @MariTolonen]

@EntraCod Best Christmas gift ever!

[Yohsuke Fukai @FukaiTY]

Published in Bioinformatics!
https://t.co/6h9SfV6boY

[Physalia-courses@ONLINE @Physacourses]

This is just amazing!
Have a look at RTutor (https://t.co/xraomAiRbT). It can generate & test R code just by “chatting” with it.
RTutor will then generate functional code to answer your question, making it easy for those without R experience
#RStats #MachineLearning #DataScience

[Mari Tolonen @MariTolonen]

@EntraCod @ksedzinski @DInoueMT Congratulations Varun!!

[Lappalainen lab @LabLappalainen]

(Please RT) We are looking to recruit a #postdoc with expertise in either biochemistry/structural biology or cell biology! Join us to study #actin dynamics, cell migration, and morphogenesis. @BIOTECH_UH @helsinkiuni
https://t.co/8a9EM5ONH5

[Volodymyr Nechyporuk-Zloy @vnzloy]

"SalienceNet: an unsupervised Image-to-Image translation method for nuclei saliency enhancement in microscopy images
Emmanuel Bouilhol et al.
bioRxiv. posted 28 October 2022, 10.1101/2022.10.27.514030
https://t.co/lCPcKPSFWj"

[kuba sędziński @ksedzinski]

Here it is, in the updated version, how multiciliated cells find their way within tissues! #TissueMechanics @NatureComms Thanks again to all authors 🥰 Check it here:
https://t.co/7lAgdKpEv3

[Helker lab @HelkerLab]

We have been recycling our dishes in the lab for almost 2 years. We have saved about 8,000 dishes🥳. Enough plastic to fill my entire office. #zebrafish #sustainability #recycle @zebrafishRock

[Mari Tolonen @MariTolonen]

@ZBiotechGuy I'm passionate for open source analysis tools like @FijiSc, but more and more I'm turning towards Python-based tools, also for AI 😊

[Mari Tolonen @MariTolonen]

Have a good weekend! Here's some contractile actomyosin in Xenopus epidermis🐸 #FluorescenceFriday