Michael Schubert

👨‍🔬🧬 using 🧫 & 💻 to study how cells go rogue at @NKI_nl • Previously @EMBLEBI, PhD from @Cambridge_Uni • #cancer #aneuploidy #omics #rstats, dash of #hpc

[Michael Schubert @_ms03]

Full advert: https://t.co/vQR28isYIj

[Michael Schubert @_ms03]

📣 We're #hiring a #PhD student! - Innsbruck - computational - 3 years - fully funded - Deadline: Feb 11th

💼 Project: scRNA-seq analysis on in-house developed cancer atlases

🔍 Looking for: candidate with experience in cancer and R/Python

[Michael Schubert @_ms03]

@deVisserKarin @Cancer_Cell @deWitLab @hannah_c_garner @m0rmart @NKI_nl @oncodeinstitute Congratulations! 🎉 This looks like a really interesting story

[Michael Schubert @_ms03]

@EBItraining This is a great idea! Are the workshop resources somewhere accessible for non-participants?

(I can't find them on the Comptency Hub page)

[zeynep tufekci @zeynep]

Ralph Baric and Ian Lipkin in the NYT raising the alarm on a new Cell paper where Wuhan Institute of Virology scientists experiment on ANOTHER coronavirus that can infect humans under grossly inadequate biosafety precautions.

“could have significant risks for people worldwide.”

[Michael Schubert @_ms03]

@paperpile Thanks! I would have never found this because it's not in the "Paperpile" top-level menu that I'm used to. I got this to work, but needed some attempts.

Sometimes the gear didn't show up, then the FAQ states a copy is made but the context menu that the current doc is edited

[Michael Schubert @_ms03]

I love @paperpile, but it really needs an option to destructively remove all its links in a google doc #academicwriting

[Michael Schubert @_ms03]

I just released version 0.9.7 of the #clustermq #rstats package: https://t.co/Q4O2P8iKhS

_Run your code on HPC or via SSH via one line of code_

Please check it out; feedback is welcome!

[Michael Schubert @_ms03]

New paper out! 🚨🥳

We thought that passenger gene amplifications can drive cancer vulnerabilities and show that RBM14 does so via cGAS-STING modulation 👇
@veronica_rendo @BenDavidLab @RameenBeroukhim @Foijer_lab

[Veronica Rendo @veronica_rendo]

So excited to see our paper describing the class of ARGOS genes in cancer out in @NatureComms! 🤩

https://t.co/fJ3RNDhZvv

This is the result of a giant effort led together with @_ms03, and executed under the mentorship of @BenDavidLab, @RameenBeroukhim, and @Foijer_lab.

🧵👇:

[Michael Schubert @_ms03]

@_alberto_gil @NKI_nl Congratulations Alberto! 🥳

[The Netherlands Cancer Institute @NKI_nl]

📢 Applications for the NKI PhD program open from Jan 1 - Feb 28. Join our international research community in Amsterdam, working in cancer biology, AI research & life sciences with leading scientists and top facilities #PhD #CancerResearch More info: https://t.co/Ln7xs1zphE

[Aylwyn Scally @aylwyn_scally]

I remain of the view that the disengagement of academics from this forum was a hugely self-defeating gesture. It scuttled what had been an unprecedented resource for academic communication and a valuable platform for public outreach.

[Michael Schubert @_ms03]

@badlogicgames There is this (haven't tested it): https://t.co/w0QDgi0bEM

[Kyle Galbraith @kylegalbraith]

All runners on @depotdev are now Ultra Runners ⚡️

3x faster GitHub Actions jobs with a switch from ubuntu-latest to depot-ubuntu-latest.

More 👇

[Sebastian S. Cocioba🪄🌷 @ATinyGreenCell]

"Quitting science", as if industrial research doesn't exist and/or there is shame in putting your *very* expensive degree to work in high level tech support, consultation, contract research, tutoring, entrepreneurship, etc, etc. Weird culty language to say leaving academia, tbh

[Ben-David Lab @BenDavidLab]

Our Review on “Aneuploidy as a driver of human cancer” is out in Nature Genetics. Check it out! 🎉

The Ben-David lab wishes everyone Shana Tova — may the new year be much better than the ending one, bringing peace and stability to all! 🙏

https://t.co/OhfhqvpaMh

[Michael Schubert @_ms03]

@Joana_MPereira @KU_Leuven Wow, congratulations! 🥳

[Jonathan Mitchel @J_E_Mitchel]

It's great to see my first paper of the PhD published in @NatureBiotech! https://t.co/uMnJ6Z1g3C. This describes our scRNA-seq method, scITD, for analyzing how the transcriptional states of multiple cell types are linked across patients. A few highlights from the paper:

[Michael Schubert @_ms03]

@larsjuhljensen I understand all that, I just thought there was a second layer to "understanding the problem", which takes into account the time for heat to reach the center (your query is ambiguous in that regard)

In any case, thanks for engaging, I don't want to drag this out for too long 😅

[Michael Schubert @_ms03]

@larsjuhljensen Does the output change if you add "Assume same size of potatoes" or "Assume same number of potatoes"?

[Michael Schubert @_ms03]

@larsjuhljensen Are we talking about 1 kg of 200g-sized potatos or one 1 kg sized potato here? 😆