So happy to see our brittle star genome led by 𝗘𝗹𝗶𝘀𝗲 𝗣𝗮𝗿𝗲𝘆 finally published in @NatureEcoEvo highlighting the evolution of echinoderm chromosomes as well as the origin of the regeneration programm https://t.co/qrr0IWXb0X
Excited to release FastOMA, a rewrite of OMA orthology algorithm that scales linearly, while maintaining OMA’s high accuracy. FastOMA can process all >2000 eukaryotic UniProt ref proteomes within 24 hours. Try it out https://t.co/helQL3wo4c
Preprint: https://t.co/vs21iN8P7o (1/4)
Did you catch @Gloveface's talk about bringing science to the public at #SMBE2023? Be sure to also check out her GBE article: Homoeolog Inference Methods Requiring Bidirectional Best Hits or Synteny Miss Many Pairs https://t.co/rU3rRW6J03
📢📢📢 The new 2023-2024 list is out! Please share widely! If you are looking for a faculty position or postdoc in ecology & evolutionary biology check out this great community run resource: https://t.co/kTkoSvB72a
Could you envision a future where inferring #orthology for thousands of species becomes possible?!
The future is already here and I'll be presenting FastOMA in #ISMBECCB2023 in Lyon!
See you in EvolCompGen @EvolComp on Thursday 27th at 15:30!
Try it out https://t.co/h2DykLPpbd
The length distribution of proteins is remarkably uniform across the tree of life ➡️ universal selection force at play. Paper by postdoc extraordinaire @Why_NeverS, with @OdileLecompte & @Gloveface.
📝Blog post + backstory https://t.co/nz6dGvbqTZ
📰Paper https://t.co/Z7HSqBrpCp
Reminder that we have 2 postdoc openings:
1) position on synteny and gene loss in 🍅w/ @SebastianSoyk https://t.co/T8fvYFVoSb
2) evolutionary structural biology to reconstruct the proteome & interactome of the first animal (urmetazoa) w/ @pedrobeltrao https://t.co/H94gM38nT8
This is part of an exciting @snsf_ch -funded interdisciplinary grant with @dirk_fasshauer, @multicellgenome and @steg0s4urus. This position is to develop cutting edge methods for evolutionary structural biology. Please apply or help us spread the word!
Bioinformatics can address these challenges! At SIB, we have researchers on it (e.g. Daniele Silvestro @unifr & @rmwaterhouse@unil), an environmental working group, and we are now looking for a *Director for Environmental Bioinformatics*. Apply or share! https://t.co/Rz6930MlFH
Looking for a #postdoc? We're looking for candidates to apply to the Beatriu de Pinos Postdoc program to join our lab @metazomics@IBE_Barcelona. 3-year contract and competitive salary. Possibility of funding until publication of selected candidates 1/2
Genome annotation quality affects so many things we do. Our brilliant Yannis Nevers @Why_NeverS devised a tool to assess proteomes—quick and easy. It reports not only *missing* but also *dubious* content!
Blog post: https://t.co/vegDQSml6I
Preprint: https://t.co/1T4JaGeojn
@sedlazeck presents Read2Tree: a new assembly-free approach to directly infer phylogenetic trees efficiently from raw reads with 0.2x coverage+. Come hear how it applied to Coronaviridae samples
Room: G
With @ddylus, Adrian Altenhoff, @SinaMajidian, and @cdessimoz#ISMB2022