Maxime U Garcia | @[email protected]

Bioinfomagician/PhD in Bioinformatics, developing @nextflowio @nf_core pipelines.
Tweets and RTs in English/French - He/him

[Maxime U Garcia | @[email protected] @gau]

Ready to work and do some real bioinformatics ;-)

[Maxime U Garcia | @[email protected] @gau]

@adamrtalbot @thechrisgrey @NVIDIAHealth @nf_core Good point, I assumed that part, but always useful to mention it

[Maxime U Garcia | @[email protected] @gau]

@thechrisgrey @NVIDIAHealth @nf_core They are both natively supported in sarek and can be enabled like any other tool -> https://t.co/ZGdqADEVGm
Please do not hesitate to report if you encounter any issue: https://t.co/ejLAgSZCnA

[NVIDIA Healthcare @NVIDIAHealth]

NVIDIA Parabricks DeepVariant and DeepSomatic are now available in the Sarek pipeline on @nf_core.

🧬 This adds to the growing library of GPU accelerated alignment and variant calling tools available in Sarek.

Try it 👉 https://t.co/u2Zx7M6Y4Y

[Nextflow @nextflowio]

Nextflow Frontier solves and validates biology’s hardest problems through closed-loop discovery.🔃 Give it a problem and a measure of success, and it turns each hypothesis into a reproducible pipeline, tests thousands of them, and plans the next round. https://t.co/mDy8w2uCIR

[Didier Sampaolo @dsampaolo]

On lance KiloPlume 🪶 (thread)

Chaque lundi, 20 idées de contenu tirées de votre activité et de l'actu de votre secteur. Et un brief complet pour vos préférées.

L'IA trouve les idées. Vous gardez la plume.

7 jours d'essai, puis dès 29 € HT/mois.

https://t.co/2bhzi2sUpM

1/5

[Maxime U Garcia | @[email protected] @gau]

@dsampaolo Sign me up whenever

[Rob Lalonde @HPC_Cloud_Rob]

Congrats to my friends and former colleagues at @seqeralabs and @nextflowio on launching Nextflow Frontier 🎉

A closed-loop, AI-centric discovery system that already beats 92% of BioML-bench entries. Can’t wait to see what scientists achieve with it.

https://t.co/3IrwZJcvUA

[Didier Sampaolo @dsampaolo]

https://t.co/zjPxQafLMq

Newsletter LVLUP de demain prête. N'oubliez pas de vous abonner, c'est gratuit et ça fait plaisir. :)

[Nextflow @nextflowio]

The Global #NextflowSummit by @SeqeraLabs is happening in just 4 days time. 2 days, 8 tracks, 50+ talks. Register for free: https://t.co/JEBimA6ajP🎤Meet the speakers in the Genomics at Scale track🧵

[NVIDIA Healthcare @NVIDIAHealth]

🧬 NVIDIA Parabricks HaplotypeCaller is now available in nf-core/sarek, a widely adopted germline analysis pipeline on @nf_core.

Building on Sarek's existing Parabricks-accelerated alignment, germline variant calling can now also take advantage of GPU acceleration.

Try it ���️ https://t.co/KQqwWWBY39

[Phil Ewels @tallphil]

New side project! I decided to pull all of my favourite features for code blocks together into a single plugin for #Astro #Starlight. Things got a bit out of hand and it now has 26 different features.

Hope it's helpful for folks! 🌟

https://t.co/ijqLOwnaNO

[Nextflow @nextflowio]

The Barcelona @nf_core Hackathon is happening next week!⏳ Choose from 16 hackathon projects or submit your own.

Today's project spotlight ⬇️
⚒️ Project → Static typing in nf-core
🧑‍💻 Project Lead → Nicolas Vannieuwkerke, UZ Gent
🔗 Project Link → https://t.co/GmNirAxcD1

[Nextflow @nextflowio]

🎙️ New Nextflow Podcast Episode: Writing Nextflow Plugins in 2026!

This one is all about Nextflow Plugins. @tallphil is joined by Jon Manning, Rike Hanssen, and Ben Sherman to discuss the world of extending core Nextflow functionality.

👀 Watch now: https://t.co/9PEmJCLPa5

[Nextflow @nextflowio]

⏳16 days to go! Join the Barcelona Hackathon at the #NextflowSummit 🇪🇸 https://t.co/04xvyZONKo

Today's project spotlight ⬇️
⚒️ Project → @nf_core /seqinspector improvements
🧑‍💻 Project Lead → Franziska Bonath, @KTHuniversity
🔗 Project Link → https://t.co/4ZNbrNTgDp

[Nextflow @nextflowio]

2 weeks to go until the Global #NextflowSummit by
@SeqeraLabs!🌎 It's online and free to attend, join us: https://t.co/FZGrSCG4qR🎤 Meet the speakers in the Platforms & Infrastructure track🧵

[Nextflow @nextflowio]

@gau (@scilifelab @ngisweden) → Building a Unified Genomics Pipeline Ecosystem at Core Facilities

https://t.co/GErf1wP6vo

[Nextflow @nextflowio]

📆 We've extended the deadline for the Barcelona Hackathon! Choose from 13 hackathon projects, or bring your own project idea. Today's spotlight⬇️

⚒️ Project → AWS megatests overhaul
🧑‍💻 Project Lead → Friederike Hanssen, @SeqeraLabs
🔗 Project Link → https://t.co/44yPPwq9Su

[Nextflow @nextflowio]

We have now have 13 projects for the Barcelona @nf_core Hackathon.⛰️Check out today's project spotlight 👇 #NextflowSummit

⚒️ Project → nf-core/sarek improvements

🧑‍💻 Project Lead → @gau, @scilifelab

🔗 Project Link → https://t.co/6oaKdKzAJs

[Nextflow @nextflowio]

Join us on Oct 13-14 for the Global #NextflowSummit by
@SeqeraLabs💻 Online and free to attend: https://t.co/ZuQBXu88jn 🎤 Meet the speakers in the Tooling and Ecosystem track.🧵

[Ace Attorney @aceattorneygame]

CELEBRATION!

To commemorate the upcoming 25th anniversary of the Ace Attorney series on October 12,
we're sharing a brand-new illustration by series artists Kazuya Nuri and Takuro Fuse,
featuring several fan favorite characters dressed to impress for the occasion!