Top Tweets for #BigDataViewer
And of course, all this became possible thanks to the team behind #imglib2 #bigdataviewer #bigvolumeviewer (4/n)
Looking into #BigDataViewer and #BigStitcher to have something nice to show for #FluorescentFriday.
#bioimaging
@preibischs @luxendo This is great, thanks for sharing the code! We do love #BigDataViewer and are working on better metadata for #BigStitcher.
Our first attempt is already out on our beta release channel, and this will definitely make our life easier to finalize it.
Feedback is very welcome :)
We're playing around with #bigstitcher for the first time with a large ish dataset (~1k 3D tiles, 4 channels) but #bigdataviewer's UI for controlling channels, groups, visibility etc seem to break on these and most elements can't be reached without a scrollbar. Help!
As usual, #imglib2 and #bigdataviewer made this easy to make.
Play with it yourself! The code's here: https://t.co/M5j4Igwo2o
@sebisabs @MorphoLg It was super interesting. With this new library (if we can access the multi resolution) we could write a #bigdataviewer adapter reading directly the CZI and solve some conundrum for our users.
Bravo seb
Opening and exploring an 8TB file from @EMBL in Australia using #BigDataViewer and OME-Zarr quite a powerful demo @tischitischer @notjustmoore
Thanks @GlobalBioImage for organising a great workshop/showcase
An opportunity to work on key @FijiSc components #ImgLib2 and #BigDataViewer with the core development team including @pietzscht
👤 🖥 Become the new #JavaDeveloper at @CEITEC_Brno @muni_cz, an international #ScientificCentre in the fields of #LifeSciences🌿and a proud holder of the #HRExcellenceInResearchAward.🏆
Apply here👉https://t.co/5KL4d0pJBp
#vacancy #programmer #joinus
If we can advance the HDF5 version in #scijava, it should become easier to use HDF5 plugins, such as Zstd and LZ4 compression in software like @FijiSc and #BigDataViewer
I have a new big green merge button to resist pushing as of this morning. #bigdataviewer
This is about @FijiSc #ImgLib2 and #BigDataViewer. Help us build software that scales to some of the largest bioimage datasets ever assembled and be part of the exciting @cziscience developer community.
👤 🖥 Become the new #JavaDeveloper at @CEITEC_Brno @muni_cz, an international #ScientificCentre in the fields of #LifeSciences🌿and a proud holder of the #HRExcellenceInResearchAward.🏆
Apply here👉https://t.co/Pekwyx2mCl
#vacancy #programmer #joinus
Great talk from @tischitischer today - about the challenges of visualising, analysing and sharing big image datasets. And next to the challenges, he presented many great solutions, including #BigDataViewer, #MoBIE, #NGFFs and the @emblebi #BioImageArchive.
#ImgLib2/#BigDataViewer join the @cziscience community. #CZI provides crucial support for talented group of developers, led by @pietzscht, who created rock-solid Java infrastructure for analysis of #bigimagedata in biology. @CEITEC_Brno becomes a new pillar of @FijiSc community.
🚨#OpenSource tools are the invisible foundation of biomedicine. That’s why we’re continuing to support open source software projects essential for scientists. Learn more about our grantees https://t.co/CeWfXhiywK
@nKiaru shows off ABBA at the #elmi2021 poster session - wow! #imglib2 #bigdataviewer #GimmeGimmeGimme
https://t.co/XG6jxY4tNG
BTW @preibischs thanks a lot for the video tutorial you placed on YouTube, made my life very easy. Also kudos on the documentation of #BigDataViewer and #BigStitcher
I haven’t played with #BigDataViewer and #BigStitcher for a while. Their new method to change the project to .n5 is awesome 🤩
@herrsaalfeld @adam_k_glaser @markkitti @preibischs Load a zarr volume and display with #bigdataviewer, two lines of meaningful code:
https://t.co/SSju3v39cJ
Starting with an introduction to MoBIE by @tischitischer, @cppape and @Sci_Wanderlust, building on #BigDataViewer, for handling huge multimodal imaging datasets
GitHub: https://t.co/JyjyfNDVu2
Project page: https://t.co/vhpx2pfdsP
#ZEISSCorrMic3D
Impressive demonstration of the #BigDataViewerPlayground by @nKiaru 😍 incorporating @pietzscht #BigDataViewer
You can navigate easily through biiig amounts of slide scanner data💪 and reconstruct 3D volumes 🤯 @NEUBIAS_COST #academy
Try it out!
https://t.co/cZtOsKHdzC
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