Top Tweets for #CryoFold
Reporting an integrative model after some time !
@JakeMiratsky employed an integrative structural biology with #CryoFold & #MDFF approach to determine the low-resolution structure of human HP1𝛼 in complex with an H2A.Z nucleosome.
https://t.co/TIXxIhVNdy
Resolving heterogeneous features of a coveted protein-DNA nucleosome complex with #CryoFold and integrative modeling, opening a new simulation area !
#JakeMiraksky's 1st paper with #DongyanTan.
https://t.co/RcTumc5mpF
Please check it out !
@ASUBiodesign @SUNY
Elated to share @EricWil39327976's beautiful #IntegrativeModel with fantastic ET+EM data (@chiulab, @gpintilie) glycan profiling by mass spec (@DocGatorDawg1), and functional infectivity assays (@JingJin10601360) using #CryoFold #MDFF.
Plz check it out !!
amazing integrative study of coronavirus NL63, with cryoET, sub-tomogram classification and averaging (@chiulab, @SLAClab), glycan profiling by mass spec (@DocGatorDawg1), MD (@abhisekhsingha1), and functional infectivity assays (@JingJin10601360)
https://t.co/Dhp6rArvww
Protein models are often averages that miss rarer but important structures. New research from @abhisekhsingha1 of @ArizonaState and colleagues using Summit at @OLCFGOV is helping better understand proteins' form, flexibility and function. https://t.co/EBYAx2OAmZ #HPC #CryoFold
#CryoFold is a data-guided tool for modeling molecular movements from cryo-EM density maps in #MatterIssue28!
Collab led by @abhisekhsingha1 w/@Al__Perez @d_kihara @emadtaj @mrinal1989 @Gterashi @17Dsarkar @ChitrakGupta2 @JhnVant & more
Check it out: https://t.co/lJ5KouN8dY
Extremely grateful that our #CryoFold work is now featured on @Matter_CP's October cover !
First cover from the team. Wishing many more to group members @mrinal1989,@ChitrakGupta2,@JhnVant, @17Dsarkar.
Big thanks @GTerashi
@ASUBiodesign @ASU_SMS
Check out the October issue of Matter!
Featuring:
🔸 Determining peptide & protein structure via cryo-EM
🔸 Shape memory in metallic glasses
🔸 Janus luminogens with bended intramolecular charge transfer
and more in #MatterIssue28: https://t.co/gMUQuPkpA2
October's cover features the #CryoFold tool for modeling molecular movements from electron density maps!
Work led by @abhisekhsingha1 @ASUBiodesign, @Al__Perez, Ken Dill, @d_kihara, @emadtaj; first authors @mrinal1989 @BeckmanInst & @GTerashi @Purdue
https://t.co/dgfCcesh1T
#CryoFold is out now @Matter_CP And it made it to the *Cover* (to be released on Oct 6th). Congrats to @Al__Perez @d_kihara @emadtaj @mrinal1989 @GTerashi @17Dsarkar @ChitrakGupta2 @JhnVant !!
Here is a link to the article: https://t.co/YGHN6qQPFd
Following is the GitHub link.
Our data-guided ensemble determination tool is now available online at @Matter_CP. Great experience developing this tool with @17Dsarkar @mrinal1989 @JhnVant @GTerashi @d_kihara @kiharalab @Al__Perez @emadtaj @abhisekhsingha1
https://t.co/isZ89ADLEX
Last week's talk @SLAClab @chiulab was a summary of the Tour-de-force methods that @Al__Perez , @RowleyGroup and our team are putting together.
@amondal_chem, #Reza and @JhnVant unveiled #CryoFold demo & tutorials.
Hope you like the session !!
https://t.co/OWRmSjhMe4
@abhisekhsingha1 Here is the GitHub link which describes how to install and use CryoFold. Maybe I will add a google drive link to the tutorials.
https://t.co/NFrvM1dE3w
Accepted to @Matter_CP, our data-guided ensemble determination tool #CryoFold. Combining #NAMD with #OpenMM, it models nearly all folded states underlying a density map. e.g. QCR6 region of complexIII @mrinal1989 @GTerashi @ChitrakGupta2 @17Dsarkar @kiharalab @emadtaj @Al__Perez
Glad to be a part of this fantastic #CryoEM community effort. The #CryoFold team (no. 73) learnt a lot :) Thanks @EMDB_EMPIAR (Cathy and all judges). High-five to @Al__Perez @17Dsarkar @GTerashi @mrinal1989 @d_kihara !!
Outcomes of the 2019 EMDataResource model challenge: validation of cryo-EM models at near-atomic resolution https://t.co/zlpPxdWTXf
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