#EnteroBase - Twitter Hashtag

about 3 years ago

… and how to start with #bionformatics without command line using online platforms and tools including @daanensen 's @Pathogenwatch @MyMicroreact @DrKatHolt 's #kleborate @keithajolley 's #BIGSdb @happy_khan 's #EnteroBase …

sylvainbrisse's tweet photo. … and how to start with #bionformatics without command line using online platforms and tools including @daanensen 's @Pathogenwatch @MyMicroreact @DrKatHolt 's #kleborate @keithajolley 's #BIGSdb @happy_khan 's #EnteroBase … https://t.co/AuNZ5ZZ523

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Sylvain Brisse @sylvainbrisse

almost 4 years ago

#EnteroBase #IMMEMXIII @happy_khan

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𝘔𝘪𝘴𝘴 𝘚𝘢𝘭𝘮𝘰𝘯𝘦𝘭𝘭𝘢 @Miss_Salmonella

almost 4 years ago

Really good number of the @royalsociety!!! https://t.co/iJoTPrr9kQ #genomicpopulation #phylogeny #EnteroBase #populationstructure #MobileGeneticElements #Microbiomes #MetabolicNetworks

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🧬💻Laura Baxter 🌱 @scientist_me

almost 4 years ago

https://t.co/YK492K5cAZ Happy publication day to this paper from #EnteroBase I've been a part of - hope bacterial population geneticists enjoy it!

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Max Cummins @maxcummins1

over 4 years ago

We then downloaded 34,176 source and ST diverse E. coli strains (thanks #Enterobase!) to explore this more. We found pUTI89 plasmids were common in many pandemic ExPEC STs but were human specific. ColV were common poultry but also humans, pigs (but not cattle), meat and more.

maxcummins1's tweet photo. We then downloaded 34,176 source and ST diverse E. coli strains (thanks #Enterobase!) to explore this more. We found pUTI89 plasmids were common in many pandemic ExPEC STs but were human specific. ColV were common poultry but also humans, pigs (but not cattle), meat and more. https://t.co/hPRWHDgYr9

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Institute for Food Safety and Hygiene UZH @Food_Safety_UZH

almost 5 years ago

Interesting study on the global spread of #Salmonella Enteritidis. The authors used more than 33,000 Salmonella Enteritidis #genomes available on #EnteroBase: https://t.co/shWgjrStzb$

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Rhys White 🧬 @RhysTWhite

about 5 years ago · Brisbane

Recently, #ST131 has emerged & spread globally. Despite widespread study of E. coli bacteraemia, the temporal & geographic patterns of key clones remains an important area of study🏴󠁧󠁢󠁷󠁬󠁳󠁿🌍 #Enterobase 2/8

RhysTWhite's tweet photo. Recently, #ST131 has emerged & spread globally. Despite widespread study of E. coli bacteraemia, the temporal & geographic patterns of key clones remains an important area of study🏴󠁧󠁢󠁷󠁬󠁳󠁿🌍 #Enterobase 2/8 https://t.co/pAYBad6FHK

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Martinique Frentrup @Martinique_F

almost 6 years ago

Our paper about the #cdiff database in #enterobase is now published in #microbialgenomics! Honored to share my first 1st authorship with @JemmingsZ and all the other co-authors! #epitwitter https://t.co/VJ6q2CFJpN

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Sylvain Brisse @sylvainbrisse

over 6 years ago

@institutpasteur Will include collaborations with @MaidenLab @keithajolley @BIUPasteur @rvmngr @jgugliel @crodrigues887 @TimDallman @JemmingsZ #enteroBase and many others

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Martinique Frentrup @Martinique_F

over 6 years ago

If you want to download Assemblies from #EnteroBase and you're too lazy to do it manually and/or are not an expert in API usage, maybe this will help you out! Thanks again @tmuuh for solving this problem for me! https://t.co/S5iDI7sVPY

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Martinique Frentrup @Martinique_F

about 7 years ago

Nice colab between @Leibniz_DSMZ_en and @IZWberlin, where we could demonstrate how easily one can determine close relatives to investigated strains using #Enterobase #cdiff https://t.co/J4gB6SJPkJ

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andrea telatin @telatin

over 7 years ago

Check this pre-print of #ENTEROBASE by @happy_khan et al, and put your entero genome in context with this user friendly web tool! 👏 So proud to work with Nabil now at @TheQuadram

Nabil-Fareed Alikhan @[email protected] @happy_khan

over 7 years ago · Norwich

I am very proud to be able to share this preprint with you. It describes ENTEROBASE and the marvelous things you can do with it. One such vignette is the genetic history of Y. pestis spanning 4000+ years. https://t.co/AJaPTRxwIH

happy_khan's tweet photo. I am very proud to be able to share this preprint with you. It describes ENTEROBASE and the marvelous things you can do with it. One such vignette is the genetic history of Y. pestis spanning 4000+ years. https://t.co/AJaPTRxwIH https://t.co/Dz8Of2cQxq

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Rob Kingsley @DrRobKingsley

almost 8 years ago

Delighted to hear from @happy_khan 's excellent keynote seminar @TheQuadram this morning that analysis of ~17,000 #Salmonella genomes using the fantastic #enterobase resource corroborates the host association of #Typhimurium #pathovariants described in https://t.co/IsyIsYXED9

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Raymond Kiu @raymond_kiu

almost 8 years ago

Such an energetic talk and practical demonstration on the use of #EnteroBase @happy_khan @TheQuadram

Quadram Institute @TheQuadram

almost 8 years ago

Welcome to Nabil-Fareed Alikhan @happy_khan from @warwickuni who's giving today's seminar on understanding genomic landscapes in #EnteroBase with cgMLST & GrapeTree https://t.co/h0x5yfgQp3

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Quadram Institute @TheQuadram

almost 8 years ago

Welcome to Nabil-Fareed Alikhan @happy_khan from @warwickuni who's giving today's seminar on understanding genomic landscapes in #EnteroBase with cgMLST & GrapeTree https://t.co/h0x5yfgQp3

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