Top Tweets for #MS2Query
A great new resource by the Naicons Srl team! Great use of complementary metabolite annotation tools including #MolDiscovery, #SIRIUS, and #MS2Query! π
#naturalproducts #discovery #microbes #metabolomics #CompMetabolomics
https://t.co/Ri9XIzLrTR
Great to see @elena_delpup & @rosina_to participating in the @mzmine_project #workshop taking place in Prague this week! We also have Niek de Jonge there to explain #matchms and #MS2Query! π #CompMetabolomics #metabolomics #massspectrometry
Ready for the Prague Computational Mass Spectrometry Workshop at the @IOCBPrague. Thanks to the organizers @mzmine_project @tomas_pluskal @rschmid1789 and others #compMS
With two presentations in a row by Kevin Mildau and @jjjvanderhooft, we thank the MassSpec-Forum2024 organizers for the opportunity to share our work during the #metabolomics session in wonderful #Vienna! π #CompMetabolomics #msFeaST #FERMO #MS2Query
We were interested in how growth promoting olive oil waste additives in their substrate affected #naturalproducts content, especially beneficial and toxic #molecules. #FERMO prioritized several #metabolites that were #annotated by #MS2Query and other tools π
I'm very excited to learn many computational metabolomics tools. Thanks a lot to @jjjvanderhooft
and his team :)
#Python #matchms #MS2Query #MS2LDA #DeepLearning #2023SummerSchool
Always a pleasure to return to CPH! π Even the weather prepared itself well for the summer school! π Looking forward to a week full of #metabolomics #CompMetabolomics including @mzmine_project, @GNPS_UCSD, @ms2lda, #SIRIUS, #matchms, #MS2Query, and much more!
Have you seen our most recent contribution yet? Here, #NiekdeJonge proudly presents #MS2Query, a #machinelearning based #computational #metabolomics tool that boosts #metabolite #annotation rates in #massspectrometry #profiles! π Check out the thread 𧡠π π
Excited to share the #MS2Query publication in
@NatureComms!πWe are very proud of #NiekdeJonge and the entire #team! #MS2Query enables #MachineLearning based #computational #metabolomics #massspectrometry #metabolite #annotation! Read our thread & paper: https://t.co/ITkZYWugcN
It was great to brainstorm with @func_metabo_lab Daniel Petras and @Robert_S_Jansen at @WUR #Wageningen about #microbiology, #native #massspectrometry, @GNPS_UCSD #molecular #networking, #MS2Query, and #FERMO! π It felt like yesterday we met in @Pdorrestein1's group Daniel!
Very happy to see our joint work on #MS2Query being published in @NatureComms --> https://t.co/jw6hm18e9P π
Combining multiple #MachineLearning models #MS2Query rapidly and reliably links unknown substances to chemically highly related compounds from a reference library.
Very proud of and excited for #NiekdeJonge,
@JorisLouwen, @Robert_S_Jansen, @me_datapoint & team! Thanks editor & reviewers for constructive feedback!π#MS2Query @NatureComms
#computational #metabolomics - interested in a "behind the scenes"? β‘οΈ https://t.co/Fgl0NP6umc #ProudPI
Excited to share the #MS2Query publication in
@NatureComms!πWe are very proud of #NiekdeJonge and the entire #team! #MS2Query enables #MachineLearning based #computational #metabolomics #massspectrometry #metabolite #annotation! Read our thread & paper: https://t.co/ITkZYWugcN
We are also grateful to #FemkeVermeir, @Robert_S_Jansen, #ElenaChekmeneva & #stephanecamuzeaux @NPCUK1 for validating #MS2Query on actual experimental data, and
@me_datapoint & @jjjvanderhooft for #supervision!π Thanks for financial support from @eScienceCenter & @WU_BioInfo!π
We are grateful to all involved: first of all #NiekdeJonge for putting in tremendous effort to create the #MS2Query package & the #benchmarking, and
@JorisLouwen for exploring the initial steps with
@me_datapoint at the @eScienceCenter as a part of the #iOMEGA #ASDI project!
It is exciting to see that #MS2Query is already in use in various pipelines across #academia and #industry! For example, the #interactive #priotirization #computational #metabolomics #tool #FERMO uses MS2Query as a part of a #novelty #scoreβ‘οΈhttps://t.co/t5Rp342B3X
It is important to realize that #computational #metabolomics #tools like #MS2Query are not possible without #OpenScience that democratizes #massspectrometry #data and makes it as #FAIR as possible. Big hand to the @GNPS_UCSD #community for growing the #public #spectral #library!
Excited to share the #MS2Query publication in
@NatureComms!πWe are very proud of #NiekdeJonge and the entire #team! #MS2Query enables #MachineLearning based #computational #metabolomics #massspectrometry #metabolite #annotation! Read our thread & paper: https://t.co/ITkZYWugcN
Very proud of and excited for #NiekdeJonge, @JorisLouwen, @Robert_S_Jansen, @me_datapoint & team! Thanks editor & reviewers for constructive feedback! π#MS2Query @NatureComms #computational #metabolomics - interested in a "behind the scenes"? β‘οΈ https://t.co/Fgl0NP6umc #ProudPI
Excited to share the #MS2Query publication in @NatureComms! π We are very proud of #NiekdeJonge and the entire #team! #MS2Query enables #MachineLearning based #computational #metabolomics #massspectrometry #metabolite #annotation! Read our thread & paper: https://t.co/mUwyhZL4fF
We are also grateful to #FemkeVermeir, @Robert_S_Jansen, #ElenaChekmeneva & #stephanecamuzeaux @NPCUK1 for validating #MS2Query on actual experimental data, and @me_datapoint & @jjjvanderhooft for #supervision!π Thanks for financial support from @eScienceCenter & @WU_BioInfo!π
It is exciting to see that #MS2Query is already in use in various pipelines across #academia and #industry! For example, the #interactive #priotirization #computational #metabolomics #tool #FERMO uses MS2Query as a part of a #novelty #scoreβ‘οΈ https://t.co/t5Rp3438Tv
It is important to realize that #computational #metabolomics #tools like #MS2Query are not possible without #OpenScience that democratizes #massspectrometry #data and makes it as #FAIR as possible. Big hand tot he @GNPS_UCSD #community for growing the #public #spectral #library!
Here, we built on our previous #naturallanguageprocessing #textmining #machinelearning based work: the unsupervised #Spec2Vec and supervised #MS2DeepScore #mass #spectral #embeddings. #MS2Query exploits both and offers an easy interface for exact matching and analogue search!
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