Top Tweets for #TransposableElement
#TransposableElement #SETDB1
SETDB1-mediated H3K9me3 deposition repress transcription of evolutionary young, full-length LINE-1 retrotransposons (human-specific L1HS & hominoid-specific L1PA2/3) in👤#NeuralProgenitorCell Sai2
No effect on proliferation, neural identity, stemness in 10 days post-CRISPR KO of SETDB1
Any exaggerated responses to inflammatory or genotoxic stress?😁
SETDB1-H3K9me3 formation on L1 elements is independent of KAP1 or HUSH🤓
@KarlssonOfelia @JakobssonLab bioRxiv 2025
https://t.co/5PgerWhRvB
"neuronal sensing of environmental conditions can alter genetic inheritance through stress-induced TE (#transposableelement) mutagenesis thus shaping genome evolution." 🤯
...and it doesn't end there: In a 2nd
@biorxivpreprint that we posted back-to-back with
@schumacherbj‘s lab we show that in addition to affecting epigenetic inheritance, temperature perception controls genetic inheritance via transposons! https://t.co/aVQoMviqNF
#AlternativeSplicing during development. #scRNAseq of mouse #oocyte to #blastocyst reveals large-scale isoform switching & #TransposableElement regulation during the maternal-to-zygotic gene transition #PLOSBiology https://t.co/tgvIqH3t5X
#AlternativeSplicing during development. #scRNAseq of mouse #oocyte to #blastocyst reveals large-scale isoform switching & #TransposableElement regulation during the maternal-to-zygotic gene transition #PLOSBiology https://t.co/tgvIqH40Vv
#AlternativeSplicing during development. #scRNAseq of mouse #oocyte to #blastocyst reveals large-scale isoform switching & #TransposableElement regulation during the maternal-to-zygotic gene transition #PLOSBiology https://t.co/tgvIqH3t5X
🧬#TransposableElement superpowers!
🌻In the sunflower family, 5S #rRNA genes diverge.
🔍We follow Cassandra, a transposon with a 5S rRNA promoter. Will it mimic the variability of the 5S?
➡️It will! Read about Cassandra's promoter mimicry!
📚https://t.co/OxVRNxO30V
1/7
From the latest issue—
Ultrasensitive Detection of Circulating LINE-1 ORF1p as a Specific Multi-Cancer Biomarker, by @mTORC3, Connie Wu, David Walt, @KathleenHBurns et al.
https://t.co/sgxBOn3D5C
@MassGenBrigham @UMLifeSciences @DanaFarber #LiquidBiopsy #TransposableElement
From the December issue—
Ultrasensitive Detection of Circulating LINE-1 ORF1p as a Specific Multi-Cancer Biomarker, by @mTORC3, Connie Wu, David Walt, @KathleenHBurns et al.
https://t.co/sgxBOn3D5C
@MassGenBrigham @UMLifeSciences @DanaFarber #LiquidBiopsy #TransposableElement
@somia_sd talks about characterisation of transposable elements in Pangenome at #PEPI_IBIS @INRAE_URGI #TransposableElement #pangenomic
OnlineFirst: Ultrasensitive Detection of Circulating LINE-1 ORF1p as a Specific #MultiCancer Biomarker, by Martin Taylor, Connie Wu, David Walt, @KathleenHBurns et al.
https://t.co/ykHNzOJjCd
@MassGenBrigham @UMLifeSciences @DanaFarber #LiquidBiopsy #TransposableElement
Now online in @CD_AACR: Ultrasensitive Detection of Circulating LINE-1 ORF1p as a Specific Multi-Cancer Biomarker by Martin Taylor, Connie Wu, David Walt, @KathleenHBurns et al https://t.co/H2gN3WZbV3 @MassGenBrigham @UMLifeSciences @DanaFarber #LiquidBiopsy #TransposableElement
Please join us in welcoming new #AppsPlantSci Associate Editor @KatieEmelianova.
Her interests include #polyploidy, #bioinformatics, hybridization, genome duplication & #TransposableElement dynamics.
Learn more at https://t.co/KC8ECTrRiX @wileyplantsci #iamabotanist
📢 [JOB ALERT] : 1 an de CDD Ingénieur-e d'étude en développement logiciel @INRAE_URGI pour améliorer la portabilité et l’évolutivité de la suite logicielle #REPET dans l'annotation des #TransposableElement : https://t.co/KMMdFYGbFw
#Conda, #Snakemake, #Singularity
📖Enjoy the story! And also the authors shining with their superpowers:
- @trim_possible: no #TransposableElement can hide, she will find them all!
- @crim_bubble: no dataset is too large, he will get it crunched!
- @sphaeromeria: no rDNA remains cryptic, she will have the info!
@somia_saidi from @INRAE_URGI present the characterisation of #TransposableElement in #Pangenome at #CNET23
Let s go to Perpignan with @somia_saidi for the French Congress on #TransposableElement #CNET2023 organized by @LGDP_Perpignan
@somia_saidi will present virtually her poster "Characterization of #TransposableElement in #Pangenomes" at #JOBIM2023 organised by @SfbiFr the 28th june from 3:10 p.m. to 4:10 p.m. and the 29th June from 2:50 p.m. to 3:50 p.m.
Very grateful to @EHA_Hematology for receiving a #KickOff grant and supporting our research on the role of #TransposableElement in #ClonalHematopoiesis
#EHA would also like to recognize and congratulate this year's 34 #EHAGrants winners on their outstanding research proposals and receipt of their award.
Happy to share our new pipeline called Tremolo specifically designed for detecting TE insertions in long-reads. Thanks to all, Mourdas Mohamed @francois_sabot @Marion_Varoqui for this huge effort. Enjoy ! @InstUnivFr @isemevol @IGH_MTP @ird_fr #TransposableElement #bioinformatics
TrEMOLO; a new software that combines assembly- and mapping-based approaches to detect transposable elements; presented by @ChambeyronS @afiston & co @umontpellier. It allows the precise analysis of haplotype-specific TE insertions
https://t.co/qTuyksUu15
To #TransposableElement afficionados: genomes are full of truncated TEs, but do you know cases of NEW truncated TE insertions (truncation and insertion simultaneously) ?
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