BCB-Lab

We perform innovative research in the areas of modeling and analyzing of biological data.

[AI-Med @med_aimed]

Mustafa science and technology foundation in collaboration with AI-Med presents:

Cutting-edge Healthcare and Medical Achievements 5th EISA summit;
“Using Artificial Intelligence in Medical Imaging”

📆Dec 2, 2020

#ArtificialIntelligence #Healthcare #MedicalImage

[AI-Med @med_aimed]

Our team designed and implemented the AI-based #COVID19 Detection system, Which recognizes anomalies that are visually hard to detect in chest CT Scan images immediately after a patient infected with #COVID19.
#AI #radiology #Medical

[Hamid Rokny @HamidRokny]

In our new study, we showed that the number of genomic interactions, called as significant by background correction models varied greatly. @loops_enhancers @4DNucleome @The3DGenome @3D_Genome @generegulation @ChromDesign @ChromatinHaiku @EpigenChromatin

https://t.co/vHCr4HFbTe

[Hamid Rokny @HamidRokny]

In CRC paper we highlighted the importance of considering both the mutation type and mutated genes in cancer biomarker discovery @wessidepraxis @UNSWMedicine @UNSWScience @wessidepraxis @CancerSPHERE @CancerAustralia @UKCGG @TCRNetwork @GarvanInstitute @kinghorngenomes @G_WCentre

[Hamid Rokny @HamidRokny]

in CRC paper, for the first time, we revealed driver genes that were mutated in multiple subtypes but with unique sequence contexts, suggesting the importance of mutational contexts.
@GenomicsEngland @kinghorngenomes @TCRNetwork @cancerNSW @GarvanInstitute @thekca @PeterMacCC

[Hamid Rokny @HamidRokny]

Using FANTOMCAT genes list, we discovered novel cancer driver genes. For example, CATG00000081433 that encompasses multiple CRC associated SNPs, was mutated in 90% of CRC-SCI samples, but rarely mutated in other cancers.
@Al__Forrest @UNSWMedicine @UNSWScience @GarvanInstitute

[bioRxiv @biorxivpreprint]

Integrative analysis of mutated genes and mutational processes reveals seven colorectal cancer subtypes https://t.co/uIhyOXe1p7 #bioRxiv

[AI-Med @med_aimed]

In AI-Med, We are utilizing artificial intelligence technologies to improve the quality and accuracy of digital health services.
#ArtificialIntelligence #healthcare

[Hamid Rokny @HamidRokny]

I am pleased to share our latest work, "CANCERSIGN", that has been published in Nature Scientific Report! We developed a new ML tool to robustly identify cancer mutational signatures. Thanks @Al__Forrest , @lab_bcb, @RabieeHamid , @diakoem , @UNSWEngineering #GSBME
PMID:31992766

[BCB-Lab @lab_bcb]

Welcome to Amin Ghareyazi as BCB's new manager. We wish Hamed Dashti, our previous manager, success and happiness in his life.

[BCB-Lab @lab_bcb]

Dr. @khademh congratulations on winning @MustafaPrize. Thanks for visiting our lab in your short time, we enjoyed your super strong positive energy and your experiences so much. 😊

[BCB-Lab @lab_bcb]

Our faculty, Dr. @MhRohban, has attended the EMBL symposium to present his latest work on automatic image analysis on vasculogenesis images. #Biomedical_imaging #Image_analysis_pipeline #Vasculogenesis #stem_cell

[BCB-Lab @lab_bcb]

Congratulations to @RabieeHamid for joining @WHO 🙂

[Hamid R. Rabiee @RabieeHamid]

It’s been a pleasure to discuss various applications of #AI in digital health and its ethical implications with my colleagues from different universities and organizations in Geneva to assist @WHO develop ethical AI guidelines in AI based health-related frameworks.

[BCB-Lab @lab_bcb]

Thanks to the invitation of the Iranian Society of Radiology, we had a very nice meeting to start our cooperation in the field of the application of artificial intelligence in analyzing radiological images.

[BCB-Lab @lab_bcb]

Congratulations to @MhRohban for his new paper's acceptance in Nature Communications.

[Nature Communications @NatureComms]

Fusion of dispersion and average profiles at the level of profiles’ similarity matrices for single cell imaging data aids capturing cell heterogeneity and comparison of populations. By @MhRohban Hamdah S. Abbasi, @snhantau @DrAnneCarpenter

https://t.co/VpZ81pY3Nv

[BCB-Lab @lab_bcb]

Congrats to our Ph.D. student @Rassa_gh for winning Ahadi's prize from National Elites Foundation.

[BCB-Lab @lab_bcb]

A very warm welcome to our new lab member 🙂 Zeinab Golgooni rejoined us as a Ph.D. fellow.

[BCB-Lab @lab_bcb]

We introduce CANCERSIGN as an open access bioinformatics tool that uses raw mutation data (BED files) as input and generates 3-mer and 5-mer mutational signatures.
https://t.co/NP7Nfv56Kf
#mutational_signature #bioinformatics #computational_biology #cancer #mutation #NMF