Salma Sohrabi-Jahromi

AI scientist @sap | PhD in computational biology @mpi_nat | views are my own | @[email protected] | she/her

[Salma Sohrabi-Jahromi @slmsoh]

Super excited to share our thermodynamic model for de-novo discovery of bipartite motifs in RNA sequences. @SoedingL @mpi_bpc

📄 paper: https://t.co/x6sby3OMcp
👩🏽‍💻 webserver: https://t.co/w1kG7EO9KA
💻 Code: https://t.co/I9tyWSSA5b

🧵We show that ...

[Salma Sohrabi-Jahromi @slmsoh]

@ZwickerGroup @ERC_Research @mpids Congratulations! Well deserved! 🎉

[Oleksandr 'Sasha' Yagensky 🇺🇦 @yagensky]

1/ 🇺🇦 As you have all seen the horrific news coming from #Ukraine over the last 2 days, many of you asked what you can do to help. This thread is a quick guide on actionable steps that every indifferent person can take now. Please share🧵

[Salma Sohrabi-Jahromi @slmsoh]

@adrinjalali @huggingface Congratulations!🎉 That’s amazing!

[Salma Sohrabi-Jahromi @slmsoh]

@isaac_fianu @ScienceMagazine @CramerLab Congrats Isaac! Fantastic work 👏

[Salma Sohrabi-Jahromi @slmsoh]

@BenedictWild @DPZ_eu Wish you all the best for the next steps!

[Salma Sohrabi-Jahromi @slmsoh]

@GonzaParra_ @BSC_CNS @Alfons_Valencia Congratulations Gonzalo and best wishes for your new position!

[Salma Sohrabi-Jahromi @slmsoh]

@croth44 @IMPRS_GS @SoedingL @mpi_bpc @uniGoettingen @Rosy_Zh @vikhuryn @milot_mirdita Amazing defense! 👏🎉 We had loads of fun making the hat.

[Salma Sohrabi-Jahromi @slmsoh]

@sarakosman @NatureSMB Congratulations Sara! Very well deserved. Have fun 🤩

[Salma Sohrabi-Jahromi @slmsoh]

@janalasser @DanVedder @HannahKeding @maxplanckphdnet @HelmholtzJrs @Leibniz_PhD_Net For a university organisation, you can also take a look at the 2020 GGNB (Göttingen university) PhD student report. We correlate mental health with supervision and working conditions: https://t.co/UJVuzPSsWy
Unfortunately, the full report was only made accessible upon request.

[Saikat Banerjee @banskt]

Happy to see our method for predicting trans-eQTLs published at @GenomeBiology. Demonstrated on #eQTL data from @GTExPortal. Fun working with @francosimonetti, @SoedingL, @Raktim7879, @KaphleAnubhav and others. Thread for a quick overview. \1

[Salma Sohrabi-Jahromi @slmsoh]

@sarakosman @MED_COMPLEX @CramerLab Congrats Sara! Great work 👏

[Salma Sohrabi-Jahromi @slmsoh]

@Ulrike_Boehm @mpi_bpc Thanks Ulrike! 🤗

[Salma Sohrabi-Jahromi @slmsoh]

Yesterday I defended my PhD thesis 👩🏽‍🎓 I am very grateful to all my colleagues @mpi_bpc, collaborators, friends, and the neighbor’s cat who supported me on my scientific journey!

[Salma Sohrabi-Jahromi @slmsoh]

@croth44 @vnzinchenko @mpi_bpc @Rosy_Zh @milot_mirdita Yes, sorry! thanks for the correction. 🙂

[Salma Sohrabi-Jahromi @slmsoh]

@thesteinegger @mpi_bpc Thanks Martin! It's hard to beat yours though. 😅

[Salma Sohrabi-Jahromi @slmsoh]

@vnzinchenko @mpi_bpc Yes! I love it. Credits mainly go to @croth44 @Rosy_Zh @milot_mirdita, and Viktoriia. You are also featured on the hat 🤗

[Salma Sohrabi-Jahromi @slmsoh]

@Blendenfleck @mpi_bpc I know right? Very therapeutic 😻 and thank you!

[Salma Sohrabi-Jahromi @slmsoh]

Persian is also a gender-neutral language and oh well... We now understand much more how to detect and correct such AI biases. It's past the time to do better than this!

[Salma Sohrabi-Jahromi @slmsoh]

If you work on CLIP, or SELEX data and are curious whether your RBP uses multivalent binding, you can help me test BMF by using our web server. Any feedback/bug report is highly appreciated!
🛠 https://t.co/OQV1VSAiwP

[Salma Sohrabi-Jahromi @slmsoh]

Super excited to share our thermodynamic model for de-novo discovery of bipartite motifs in RNA sequences. @SoedingL @mpi_bpc

📄 paper: https://t.co/x6sby3OMcp
👩🏽‍💻 webserver: https://t.co/w1kG7EO9KA
💻 Code: https://t.co/I9tyWSSA5b

🧵We show that ...

[Salma Sohrabi-Jahromi @slmsoh]

... BMF can predict sequences bound in-vivo based on in-vitro data in a cross-platform validation. For highly predictive motifs, the spacer length is consistent across different experimental techniques.