Sol Genomics Network

Online database for plant biology. Tweets by @SahaSurya

[Sol Genomics Network @solgenomics]

New #tomato reference SL4.0 and annotation ITAG4.0 released in time for the XVI #Solanaceae Conference #sol2019
🍎🍎🍎🍎🍎🍎🍎🍎
Highlights: https://t.co/oGZyfRuLyC
Preprint: https://t.co/Ncfn2NQvX9

[Sol Genomics Network @solgenomics]

Check out https://t.co/dON1ZUooxE to see this in action. More details at https://t.co/qPgnLjBI48
#PAG30

[Aureliano Bombarely @aubombarely]

Lukas Mueller closes the Allele Mining session at #PAG30 with a presentation about BreedBase. He mention that BreedBase derives from CassavaBase and initially from SGN @solgenomics. He talks about a digital ecosystem based on Standard Operating Procedures (SOP) for trials, SNP…

[Surya Saha 🧬⚙️👨‍💻📊 @SahaSurya]

Also includes amazing graphics by @Marina_Entom
The methods flowchart is my favorite #MethodsMatter
https://t.co/utjN1ZkgVb

[Sol Genomics Network @solgenomics]

Data Management in Multi-disciplinary African RTB Crop Breeding Programs
https://t.co/4T4niCw4WS

[Zhangjun Fei @fei_lab]

Pan-genomes of tomato and potato. Back-to-back papers in Nature by Sanwen’s group. https://t.co/re8MTnsJAd https://t.co/8gUvhnl7yT

[Boyce Thompson Inst @BTIscience]

#CitrusGreening disease is ravaging the US citrus industry. BTI’s @SahaSurya tells us about his efforts enlisting undergraduate students in the fight against this devastating agricultural disease.

https://t.co/JYCY4ZBkD1

[usadellab @usadellab]

The "very wild" Solanum lycopersicoides genome and introgression line maps shedding light on sec. metabolites & stress tolerance. Collaboration with so many great colleagues colleagues @BTIscience @fei_lab @solgenomics @JohnInnesCentre @MPIMP_Potsdam ... https://t.co/jlxVQvgJcc

[Boyce Thompson Inst @BTIscience]

#CitrusGreening disease is ravaging the US citrus industry. Join BTI’s @SahaSurya in this month’s Breaking Ground as he tells us about his efforts enlisting undergraduate students in the fight against this devastating agricultural disease.
https://t.co/hvoPrk9xNW
4/19, 12pm EST

[Surya Saha 🧬⚙️👨‍💻📊 @SahaSurya]

@AgBioData Please submit feedback via issues
https://t.co/Sespx098Fi

[Surya Saha 🧬⚙️👨‍💻📊 @SahaSurya]

Do you use GFF3 files? Do you have to interpret bespoke attributes and custom tweaks before you can parse them? You might want to check out recommendations from the @AgBioData GFF3 working group for refining the GFF3 format
https://t.co/JnONlEYmeX
#genomics #FAIR

[Surya Saha 🧬⚙️👨‍💻📊 @SahaSurya]

ICYMI - Research Associate position open in the Mueller lab to work on @CitrusGreening and AgriVectors projects

Opportunities to develop independent and collaborative research projects!!
https://t.co/SlX0xd5t6u
#AcademicJobs #Database #Ag #insect #plants #Bioinformatics

[Surya Saha 🧬⚙️👨‍💻📊 @SahaSurya]

Research Associate position open in the Mueller lab @BTIscience @Cornell for @CitrusGreening
and AgriVectors projects

Plenty of opportunity to develop independent and collaborative research projects!!
#AcademicJobs #Database #bioinformaticsjobs

https://t.co/SlX0xd5t6u

[Jenna Hershberger @jennahersh]

Interested in using spectral data in your plant breeding program? 📸🌱🌈
Check out 𝒘𝒂𝒗𝒆𝒔, our new #rstats package now on #CRAN with Breedbase integration!

@GoreLab_Cornell @solgenomics @robbins_lab #CornellSIPS https://t.co/drw89iuzs0

[Sol Genomics Network @solgenomics]

@joda4 Seems to be up now

[Surya Saha 🧬⚙️👨‍💻📊 @SahaSurya]

Please share or consider applying: Recent MS graduate interested in #genomics and #databases? We are looking for a #bioinformatics programmer for @CitrusGreening @solgenomics and @NextGenCassava. Lots of opportunities for collaborative research

https://t.co/gtAFsUh4cc

#jobs

[Boyce Thompson Inst @BTIscience]

The 2020 Solanaceae International Online Meeting was a huge success! The event was organized by several BTI community members. Congrats to all involved! https://t.co/ejjSBFJ4o1 @solgenomics #SOLIOM2020

[Aureliano Bombarely @aubombarely]

We would like to thanks all the attendants of our Network of genes and metabolites session at #SOLIOM2020. We got a peak of 350 participants attending it.

[Estefania Tavares @EstefaniaTav]

'Uncovering of epistasis effects between two closely related MADS-box genes in🍅(j2&ej2) associated with inflorescence branching' - And how breeder neutralized this negative epistasis? - Sebastian Soyk beautifully explained the molecular cues behind this phenomenon! #SOLIOM2020

[Aureliano Bombarely @aubombarely]

#SOLIOM2020 - @Matt_Ben_ : 80% of the Insertions/Deletion SVs in tomato are associated to #TE. Gypsy and Copia are the main contributors. A single TE family, #Rider, explains > 25% of these events. Some of them have been associated to phenotypic diversity.

[Giovanni Giuliano @giulianolab1]

First day of the Solanaceae online workshop. 380+ participants, lots of interesting talks, posters, and discussion. #SOLIOM2020

[Aureliano Bombarely @aubombarely]

@SandyKnapp closes the session for #SOLIOM2020, reminding about the break and the poster session. She also mention that there is a Solanaceae Diversity Seminar series at https://t.co/SIoEaKkdqI. I agree, it is highly recommended! (#SolSeminarOnline).