CCBB

@UCSanDiego's Center for Computational Biology & Bioinformatics. Providing world-class bioinformatics expertise for genomic data and #PrecisionMedicine.

[CCBB @ucsdccbb]

Excited to see our work out in Nature Protocols! We develop a tool to map the shared gene networks underlying related diseases. https://t.co/PGRc8IGXRp

[Helen Willsey @goodfrognosis]

Check out our latest work studying comorbidity between autism and congenital heart disease. Great collaboration with @TreyIdeker @sbr28 @WillseyLab and Khokha lab https://t.co/R3oyW8HYPB

[CCBB @ucsdccbb]

CCBB is looking to hire a junior Bioinformatics Analyst- please share widely! https://t.co/DELqfuHGS8

[UC San Diego Health Sciences @UCSDHealthSci]

Lots of space bio research out of @NASA @CellPressNews today! Part of this effort, Sara Brin Rosenthal (@sbr28) & Kathleen Fisch (@kathleenfisch) @ucsdccbb used computational methods to spot differences between mice on @Space_Station and Earth-bound mice
https://t.co/krC32IOiOa

[CCBB @ucsdccbb]

Identification of Lineage-specific Transcription Factors That Prevent Activation of Hepatic Stellate Cells and Promote Fibrosis Resolution. - PubMed - NCBI https://t.co/jkde48M5tn

[CCBB @ucsdccbb]

Read about CCBB's newest paper, "The C. elegans RIG-I homolog DRH-1 mediates the Intracellular Pathogen Response upon viral infection" @ https://t.co/PiXz29bMuN

[QBI @QBI_UCSF]

The #PCMIsymposium has concluded! Thank you to all of our speakers for sharing your work & joining us in an effort to build a community of interdisciplinary researchers that drive the field of psychiatric disorder research forward! See more pictures here: https://t.co/Vs1TPCcOr9

[Brin Rosenthal, Ph.D. @sbr28]

That feeling when your authentication code is about to expire but you go for it anyway

[The NDEx Project @NDExProject]

The NDEx2 #Python client v3.3.0 is out!
Install now via PIP. Docs here: https://t.co/yOkhBlDJ43
@CancerCellMap @cytoscape #nciitcr @CIViCdb #networkbiology @WikiPathways @ucsdccbb

[The NDEx Project @NDExProject]

A new build of the cyNDEx-2 @cytoscape app (v2.3.1) has been released! Download the latest version now or update directly via the Cytoscape App Manager.
#nciitcr #networkbiology @WikiPathways @ucsdccbb @CancerCellMap @CIViCdb

[CCBB @ucsdccbb]

#PLOSCompBio: Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks https://t.co/7xXw7DBG63

[Brin Rosenthal, Ph.D. @sbr28]

Hey I won a poster prize!! 😱 thanks @xanderpico and the #NetBio organizers!! #ISMBECCB2019 #ISMBECCB

[Holger Heyn @hoheyn]

STILL DON'T KNOW how to plan your #SingleCell transcriptome experiment?

READ HERE OUR TUTORIAL: Guidelines for the experimental design of single-cell RNA sequencing studies @NatureProtocols.

https://t.co/R6lq7tcUM0

[CCBB @ucsdccbb]

CCBB has a new paper out :-) Read more about Focal Adhesion Kinase (FAK) Regulation of Programmed Death-1 (PD-1)/Programmed Death Ligand-1 (PD-L1) checkpoint signaling in a mouse model of epithelial ovarian cancer https://t.co/PTWtte4yC2

[The NDEx Project @NDExProject]

NEW! 2 collections with over 500 curated human pathway diagrams from @WikiPathways now available in @NDExProject:

https://t.co/kCYXpsizpA

Thanks to @xanderpico and @ariutta for making this resource available
@cytoscape @CancerCellMap #nciitcr #networkbiology #compbio @ucsdccbb

[CCBB @ucsdccbb]

Activated Hepatic Stellate Cells and Portal Fibroblasts contribute to cholestatic liver fibrosis in MDR2 knockout mice https://t.co/17ZR7pBJty

[Brin Rosenthal, Ph.D. @sbr28]

Hear Pancreatic Cancer Stem Cells ROR https://t.co/yLrKJJbOM7

[CCBB @ucsdccbb]

integrative investigation into causes and treatments for pancreatic cancer using #crispr technologies and #network analysis 'A Multiscale Map of the Stem Cell State in Pancreatic Adenocarcinoma' https://t.co/p896FdKday

[CCBB @ucsdccbb]

#Check out CCBB's 2 new papers in Cancer (@AmericanCancer) & Epigenetics (@tandfonline)! https://t.co/wmMSBVGZSG and https://t.co/3s5gxv3yrV #science #Parkinsons #UCSD