Ulysse Guyet

PhD in marine microbial ecology

[Emmanuel Bouilhol @EBouilhol]

Thanks to the @INSTICC for this Bioimaging conference and for the award (given here by Hugo Gamboa). Hope it will shed some light on the possibilities to use generative networks to enhance images, such as SalienceNet is doing for the #BioImageAnalysis of nuclei.

[Ulysse Guyet @ulysse_guyet]

New paper out in @ISMEJournal

"Differential global distribution of marine picocyanobacteria gene clusters reveals distinct niche-related adaptive strategies"

Check it out !
https://t.co/pLzHJab5m6

[Macha Nikolski @MachaNikolski]

Our VirHunter #tool suite for detection of novel #RNA #viruses in plant RNAseq data is now on @galaxyproject. Thanks to @bjoerngruening for seamless integration of #deeplearning models
https://t.co/raA5Kqoix4
#bioinformatics #research

[Macha Nikolski @MachaNikolski]

#BestPaper #award at #bioimaging conference for our work on #DeepLearning style transfer for nuclei salience enhancement in #microscopy #images. Kudos to @EBouilhol for his excellent work and billiant presentation! #research @univbordeaux @CNRSAquitaine
https://t.co/3Xje4SZiH1

[Macha Nikolski @MachaNikolski]

For our next #bioinformatics #seminar (Feb 21) Daniel Gautheret @DGautheret will speak about the #RNA discovery in tumor samples through k-mer analysis #Science #cancer @univbordeaux @DepartementSBM @CNRSAquitaine https://t.co/2nyrbmlzRj

[Macha Nikolski @MachaNikolski]

We are looking for a #postdoc to work in the context of the EU @EOSC4Cancer project. If you are enthusiastic about advancing #federated data access and #openscience to enable cancer #data analysis across Europe, write to us!
https://t.co/wAD6PknEUx **please RT / share**

[Macha Nikolski @MachaNikolski]

Congrats to Domitille Chalopin! She won the 3rd poster prize for work on building the innate immunity atlas of hepatocellular carcinoma and unravel the differentiation hierarchy of myeloid NK cells and MDSCs #bioinformatics #CancerResearch @domitille_ch https://t.co/f3ZUIp0zmg

[Macha Nikolski @MachaNikolski]

#ECCB2022 Workshop on #MachineLearning Good Practices is about to start. An exciting program ahead, tune in! #bioinformatics #AI #ML https://t.co/0PwzOoalkq

[ECOMAP @phytopk]

Very happy to share the first article of @FerrieuxM with a bunch of @phytopk, @SBRoscoff, @LOMIC_UMR7621, @hkust and @warwickuni colleagues.

https://t.co/25h9XhtIir

[Macha Nikolski @MachaNikolski]

Our new VirHunter #DeepLearning method is in press. It helps to detect #viruses in #HTS samples. Kudos to brilliant #PhD students @gregoruar @MaryamKhalili62 and all the @inextvir team #bioinformatics #research @univbordeaux @CNRSAquitaine @DepartementSBM
https://t.co/RFytNNA7Ss

[Mariana Câmara dos Reis @mcamaradosreis]

Happy to share the preprint of my first PhD paper!

https://t.co/ny9CBjl2sY

In this work we explored the phycosphere of Emiliania huxleyi in a natural bloom and in laboratory assembly experiments.
@RedseaPlankton @HenryNi95439405 @DeColomban @phytopk @TaraOcean_ @RCC_algae

[ECOMAP @phytopk]

A great book chapter from @FPartensky, @L_Garczarek and @CyanolabDE on the molecular ecology, role and potential biotechnological applications of marine cyanos. @SBRoscoff, @CNRS_dr17, @ScienceSorbonne

[Alexis Groppi 🦋@agroppi.bsky.social @agroppi]

Proud to have Domitille Chalopin-Fillot as a driving force in the team @CBiBordeaux @univbordeaux https://t.co/iSQH5DdLlY #journeeinternationaledesdroitsdesfemmes

[ECOMAP @phytopk]

@h_dore,@leconte_jade,@drmartyo,@SoleneBreton,@D2mory,@uly_guy, @mhoebeke_sbr,@warwickuni, @r1corre, @FPartensky,@ChristopheSix1 & @L_Garczarek reveal the main differences between open-ocean and coastal Synechococcus communities
https://t.co/Ds1KTTxgVo

[Macha Nikolski @MachaNikolski]

A brilliant #postdoctoral scientist at @ImmunoConcept and @CBiBordeaux - Domitille Chalopin-Fillot - shares her #PhD experience to celebrate the #InternationalWomensDay https://t.co/g7oQLYKHyi
#JourneeDesDroitsDesFemmes #FemmesEnScience

[IFB_Bioinformatique @IFB_Bioinfo]

⚠️#JobAlert A position of lecturer in #Bioinformatics and Biostatistics has just been opened at the University of Bordeaux ! https://t.co/v4JQHUqzXi
📆Application deadline : 28 June 2021

@CBiBordeaux @MachaNikolski @agroppi

[Ulysse Guyet @ulysse_guyet]

My first author PhD paper is finally out in @FrontMicrobiol ! Congrats to co-authors !
#Synechococcus #transcriptomics #acclimation #adaptation
https://t.co/KBSmU4cLh6

[Fabrice SBR @fabrice_sbr]

The Roscoff crew & alumni @SBRoscoff attending the 5th national conference on environmental genomic in La Rochelle @INEE_CNRS @Inra_France #AD2MLab

[Ewan Birney @ewanbirney]

Vous êtes français, étudiant en université ou en grande école? Intéressé par la bioinformatique ou l'apprentissage automatique en biologie? Nous proposons des stages @emblebi en 2019 https://t.co/5fnkoTtZiS

[Shane Hogle @brochlorococcus]

new results from my bud Jamie Becker (and yours truly 😉). isolates from 2 notoriously difficult-to-culture marine groups now growing together (stable for > 2 years). a great system for exploring microbial interactions!

@brochlorococcus @ChisholmLab_MIT

https://t.co/LJnWV28lni