Yohann Potier

data @TesseraTx. Distracted from distraction by distraction.

[Manuel Llinas @LlinasLab]

And so it begins…

[Pearl Freier @PearlF]

15 countries incl Egypt, Canada & Australia are ahead of US in their potential to eliminate hepatitis C in their countries during this decade according to story attributing the data to nonprofit Center for Disease Analysis Foundation @CDAFound https://t.co/HHU8123MS9.

[Evan Floden @EvanFloden]

It can be tough out there in life science. We have put together a list of some of the most exciting open scientific roles where Nextflow enthusiasts can use their skills.

[Ash Jogalekar @curiouswavefn]

Shoutout to Dover publications which has republished some of the greatest science and math books of the 20th century. What's your favorite?

[NumFOCUS @NumFOCUS]

❗Sponsor Update❗

We are thrilled to add @TesseraTx to the growing list of NumFOCUS corporate sponsors! Thanks for your support and the impact you're making on the Open Source Community! 😃

[Eric Wastl @ericwastl]

For the ninth(!) year in a row, I will be releasing 25 programming puzzles over the first 25 days of December over on https://t.co/yUcqHAUbop! It's completely free thanks to AoC++ supporters and thanks to sponsors. If you want to check it out early, all past puzzles are still up!

[Natalie Ma @NatalieMaPhD]

Struggling to keep up with the explosion of software in the life sciences? We were too.

So we built the life science software landscape, a map of >300 software products in preclinical R&D, organized by function and specialty.

https://t.co/VNml4683Tu

#biotech #techbio #SaaS

[Ming "Tommy" Tang @tangming2005]

Serious Q: What's the difference between bioinformatics and computational biology? I got this question from a father who wants to choose a major for his daughter in college by email.👇 🧵

[Vivek Mutalik @vivek_mutalik]

Whitehouse released much awaited executive order report 🔥 on “Bold goals for biotech & biomanufacturing”

One of the 😳goals: “In 5 years, sequence the genomes of one million microbial species and understand the function of at least 80% of the newly discovered genes” 🤯

[Mike Vella @vellamike]

.@nanopore is moving from FAST5 to POD5 - a raw data format based on @ApacheArrow. You can convert your FAST5 files using a browser-based tool we built using WebAssembly! (Runs locally, no data leaves your device). https://t.co/NJrqxUDNkh

[Jesse Johnson @jejomath]

I’m excited to announce that we’ve finished production on my mini-book about the Reciprocal Development Principles for embedded #biotech #data teams. The kind folks at Saturn Cloud have covered the editing and publishing costs so that we can make it available for free.

[Yohann Potier @ypotier]

@Ubunta @Polar Glue job if you’re using AWS. Because of the size Python for spark or EMR could be useful but you could try a simple jdbc connection to MySQL and parquet output.

[Athanasios Baltzis @ath_baltzis]

Thrilled to announce the very first release of the nf-core/proteinfold pipeline!!! 🚀🚀🚀
#AlphaFold #ColabFold

[Jan-Philipp Quast @QuastJP]

Excited to announce the release of #ggplate on CRAN! ggplate is an R package that enables easy visualization of culture and microplate data.

Find out how to use it here:
https://t.co/JGr59FiA2Q

1/5
#rstats #DataScience #datavisualization #Biology #microbiology #AcademicChatter

[Robert Aboukhalil @RobAboukhalil]

🥳 New on https://t.co/3DKXXBduDD: Bioinformatics debugging puzzles!

Featuring file format issues that are common in bioinformatics. See if you can debug your way out: https://t.co/YAgxsbbsMo

Let me know if you have ideas for other common bioinformatics command-line issues.

[Daniel Rigden @DanielRigden]

A pleasure and a privilege to be assessor again at #CASP15. A mix of spectacular success and the occasional intriguing failure. Looking forward to hearing from the predictors and discussing future directions. Thanks @AJSimpkin @rmk_ccp4 @shah_comp526 @DavidLMurphy3 Filo and Luc.

[Bits in Bio @bitsinbio]

Want to influence the next generation of software in the life sciences? Fill out this survey: https://t.co/IAEb0DNuvK

[Liang Chang @liangc_science]

8 Books about Biotech/Pharma Companies

[Anne Carpenter, PhD @DrAnneCarpenter]

3 years of work... the JUMP-Cell Painting Consortium has now released the world's largest public Cell Painting dataset!

117,000 compounds, 13,000 overexpressed genes, 8,000 gene knockdowns, w/images and extracted profiles 🤯

Data @ Cell Painting Gallery: https://t.co/1huLkybLtF