@kimreynolds_lab based @UTSWMedCenter show that biochemical coupling between metabolic enzymes shapes the range of enzyme activities sufficient to rescue cell growth
https://t.co/eFjUMa0Xnt
Physical protein interactions constrain interface sequence. But what about non-binding "biochemical" interactions in metabolism? We used deep mutational scanning to map sequence constraints for two enzymes that catalyze consecutive metabolic reactions: https://t.co/avrfd23Zs8
The “ORBIT for E. coli” paper is out in Nucleic Acids Research! https://t.co/v4HvqMl3NB
**Perform genetics (e.g. deletions) without any PCR / cloning – just transform an oligo!**
The paper demonstrates benefits over λ Red & shows how oligos scale to high throughput libraries.
Our @NIDDKgov lab is seeking a #postdoc for exciting project assessing how human #liver in #MASLD handles fasted-to-fed transition.
Unicorns comfortable with bioinformatics, molecular biology and physiology should apply.
Details 👇
Friends please RT!
https://t.co/ugwUtsOkBK
Proud to share our recently published work from @kimreynolds_lab! Ever wanted to quantify epistatic relationships between genes? Here’s our proposed model in E. Coli!
A continuous epistasis model: Cell Systems https://t.co/Diq7BV9zGw
#UTSW#genetics#systemsbiology#mstp
Goood (late) morning! This is Phil Brown (@B3Phil) here - long time metabolism fan, and current student in the Molecular Metabolism & Metabolic Disease Track! I’m at the controls of the UTSW3MD Twitter (X?) account today - so I’ll share about myself and a day in the life of 3MD!
Our 1st preprint!
We developed a genetic toolkit for E. coli that directly uses cheap DNA oligos to specify kb scale mutations. No PCR/cloning to delete genes!
The paper demonstrates benefits over λ Red & gets fancy w/ pooled mutant libraries. 1/15
https://t.co/8QvDOqliqo
Congratulations to @ginajpark on receiving the 2023 Ida M. Green Award! In her dissertation research, Gina discovered the mechanism of mRNA capping by SARS-CoV-2, involving a novel reaction catalyzed by a pseudokinase domain. Congratulations, Gina!
Cornell is increasing grad stipends to $43k for next year, requiring summer funding to be provided for all PhD students, cutting grad tuition costs for private Cornell colleges cause they are currently higher than the public ones
I recently learned that my tenure application was approved!! So grateful to all the fantastic students, fellows, and staff that I've had the privilege of working with. What a great lab team. And excited for what comes next! @MolBiophysUTSW@LHBioinf_UTSW@UTSWcomps
RESEARCH | Led by Jian Xu (@UTSWNews):
The authors provide insight into the regulation of branched-chain amino acid #metabolism and its impact on whole-body physiology by identifying and characterizing a metabolon formation.
https://t.co/oY1AvM3ACL