Genevieve Hoopes Halvorsen

Plant Scientist @SimplotCompany. Opinions are my own.

[Dr. Ben Mansfeld @BenMansfeld]

🎉It's happening!🎉
The *new* Mansfeld Lab @WUSTLBio is recruiting #PostDocs! If you are interested in plant-biotic interactions at a systems scale, want to work on genome assembly & transcriptional networks + more? Join our group! DM for some more info... pls RT!!

[ಜ್ಯೋತಿ @drjyothi_kumar]

Glad to see my 1st paper frm @nrt_impacts as co-corresponding author w @drtlong & the dream #gradstudent team 🙌 @FabioGomezCano1 @sethwhunt @SLotreck @davismathieu @McKenaLWilson now published in @CourseSource
https://t.co/0f08HAQ3Zg

[James Schnable @szintri]

Publishing a complete, telomere-to-telomere assembly of the vast and tangled maize genome, filling in every remaining gap. https://t.co/NduSRB41Ro

[Genevieve Hoopes Halvorsen @GenevieveHoopes]

We're hiring a Molecular Breeder focused on association analyses, modeling (including machine learning), and candidate gene identification in potato and strawberry. Apply at the link below: https://t.co/DXv65Voiiz

[Chenxin Li, PhD (@chenxinli2.bsky.social) @ChenxinLi2]

Happy to announce that our paper on single cell omics (RNA + metabolites) for medicinal plant Catharanthus is officially online. This is a fruitful collaboration between @OConnor_lab & @TheBuellLab. This is my first paper for my postdoc work. https://t.co/ZHt0GXqOQ3

[Robert VanBuren @bob_vanburen]

Excited to share our new paper led by @JeremyPardo2 where we developed a predictive model for drought stress in maize and sorghum, and identified a deeply conserved drought response between species. @MSU_PRI @addie_maize @EdBuckler @hauteHominy https://t.co/WepBt96Mho

[Michael Schatz @mike_schatz]

Introducing Panagram by Katie Jenike et al: Alignment-free visualization & analysis of pan-genomes. 31 new genomes (@PacBio Sequel + Revio). Find core genes & haplotypes essential for flowering time, fruit shape & more in seconds! #PAG30 #Bioinformatics https://t.co/hd45RkUhS9

[Charity Goeckeritz, PhD @CherrityG]

Just in time for #PAG30 -- our preprint for the sour cherry 'Montmorency' genome is now up! Turns out this allotetraploid is trigenomic, and one of its progenitors was likely an allotetraploid itself.🍒🍒#Polyploidy #Rosaceae @MSUAgBio @CCherriesUK https://t.co/qhU5SSMdVQ

[MultiQC @MultiQC]

New release! @MultiQC version 1.14 just hit the shelves, and it's a big one! 🎉 Massive thank you to everyone who contributed (there were a lot of you!) 🙇🏻‍♂️

https://t.co/U4C9HrYH9V

Here's a short thread covering some of the highlights.. 🧵

[Genevieve Hoopes Halvorsen @GenevieveHoopes]

Excited to share our work on the circadian clock in potato, where we found robust circadian rhythms in tubers detached from the rest of the plant 🥔

Thank you to everyone who contributed to this work, especially Eva Farre and @TheBuellLab!

[Plant Direct Journal @PlantDirectJ]

Keeping time in the dark: Potato diel and circadian rhythmic gene expression reveals tissue-specific circadian clocks @GenevieveHoopes @ASPB @Wileyplantsci @SEBiolog #PlantSci https://t.co/b4oeNNYnd4

[BioChambers @BioChambers]

Tubers tell time!
Congratulations @GenevieveHoopes, Daniel Zarka, Anne Feke, Kaitlyn Acheson, John P Hamilton, @DaveDouches, @robin_buell, and Eva Farre!
#PG2Research #Potato #CircadianRhythm
https://t.co/TfS1aiMAKN

[Buell lab @TheBuellLab]

Our pre-print with the @OConnor_lab on using single cell multi-omics in Catharanthus is live on bioRxiv. See how we leveraged a large suite omics approaches to examine specialized metabolic pathways in plants!
https://t.co/aEoRKgIoqb

[Buell lab @TheBuellLab]

The Buell Lab websites (https://t.co/jEHGhIyHcF,https://t.co/QK1EXxNK3b, etc) will be off-line until 6/27/22 due to a technical issue.

[Genevieve Hoopes Halvorsen @GenevieveHoopes]

@KEBRhoades If you want an R option, I've used the VennDiagram package
https://t.co/57HwRYLMVA

[Genevieve Hoopes Halvorsen @GenevieveHoopes]

It was an honor to share the collective work of the Potato PanGenome Consortium at #AGBTAG22

[Buell lab @TheBuellLab]

Excited to see @TheBuellLab graduate @GenevieveHoopes present our work on phased, chromosome-scale assemblies of tetraploid potato at #AGBTAG

[Adam Phillippy @aphillippy]

Today is the big day! The #T2T consortium is claiming victory and announcing that we have finally uncovered every last bit of the human genome! The papers are out today 🥳🧬 https://t.co/m8wgy09JBs

[Anna Pardo @AnnaHaber8]

Pleased to share this work I was part of with @JeremyPardo2 @bob_vanburen, now published in PNAS!
A comparative genomics examination of desiccation tolerance and sensitivity in two sister grass species https://t.co/FzW6WlKhvN

[Genevieve Hoopes Halvorsen @GenevieveHoopes]

We're also open to hosting an internship for a current graduate student

[Genevieve Hoopes Halvorsen @GenevieveHoopes]

We're hiring multiple levels (BS/MS and PhD) on the Molecular and Cellular Biology Team @SimplotCompany

Check out the job descriptions below to apply:
https://t.co/DTULAA4cG0
https://t.co/RX3seMI6im

[Genevieve Hoopes Halvorsen @GenevieveHoopes]

We are particularly interested in individuals with experience with homologous recombination, use of plant viruses, or a background in plant promoter elements.