Yih-Chii Hwang

bioinformatician/computational biologist/genomics scientist
@DNAnexus Product Management. Tweets are my own.

[Yih-Chii Hwang @YihChii]

@PacBio HiFi is great for calling SNPs and small-INDELs. Read us applying @GoogleHealth's DeepVariant and @Sentieon's DNAscope. Impressive to see these #MachineLearning methods help detect genetic variants, & how much #longread sequencing tech advances. https://t.co/QEZINa5V5a

[DNAnexus, Inc. @dnanexus]

The DNAnexus-enabled @uk_biobank Research Analysis Platform Surpasses 5,000 Users in Two Years. The team at UK Biobank continues to set the standard for future global health research projects & we are proud to partner with them: https://t.co/aEMKYj8vhw

[Li-San Wang @lisanwang]

We are hiring! Research Coordinator - Asian Cohort for Alzheimer's Disease (ACAD) study. Join us in serving our community. @acadstudy @PNGC_UPENN

https://t.co/ItfDS0JbWi

[Yih-Chii Hwang @YihChii]

I am presenting a poster by @Chai_Arkarachai and me at #ASHG2022 "Common and Rare Variants Genetic Association Analysis of Late-Onset Alzheimer's Disease in 500,000 Exomes from UK Biobank" using #UKBiobak Research Analysis Platform now (3p-4:45p PT). Find me at PB3341!

[Yih-Chii Hwang @YihChii]

I am at #NextflowSummit and in Barcelona this week. Looking forward to sharing our @dnanexus Nextflow solution with the community. If you are around, come say hi 👋

[DNAnexus, Inc. @dnanexus]

Excited for the #NextflowSummit? Join us today at 6:15 PM CET to hear from Yih-Chii Hwang, Ph.D. about her work on “Bringing GxP compliance to Nextflow workflows”. See full event info at https://t.co/EpIhLrpQPk

[Yih-Chii Hwang @YihChii]

👩‍💻👨‍💻👩‍🔬👨‍🔬

[DNAnexus, Inc. @dnanexus]

DNAnexus just got named one of Fast Company’s 100 Best Workplaces for Innovators! Read more at https://t.co/baXs12kf7y
#FCBestWorkplaces @FastCompany

[DNAnexus, Inc. @dnanexus]

Singing “all by myself” composed by a colossal #biomedical data set? Learn more about simple rules for running large-scale #DataAnalysis with fewer problems: https://t.co/HLdlTsoIvU
@Chai_Arkarachai @YihChii

[DNAnexus, Inc. @dnanexus]

Curious about large-scale #data processing in #bioinformatics? These simple rules will give you a head start. Read more: https://t.co/QwDVkpRhYK
@Chai_Arkarachai @YihChii

[Jason Chin @infoecho]

Based on extensive large-scale work with collaborators, @Chai_Arkarachai wrote https://t.co/iS9tdPLgMb
Additional details about the thought for processing large datasets in #Bioinformatics #Genomics, please check out this in #DNAnexus Scientific Frontier:
https://t.co/lIpFEEB7kf

[Arkarachai Fungtammasan, PhD @Chai_Arkarachai]

@YihChii, @infoecho, and I wrote additional consideration points in large-scale data processing https://t.co/RhqKSVlXiX as a supplement to our “Ten Simple Rules for Large-scale Data Processing” published last month in PLOS Computational Biology. Hope you enjoy!

[Jason Chin @infoecho]

I got this after ASHG19 in the Huston Airport. It was indeed actually a good "fortune". Working with @sedlazeck @GenomeInABottle @mike_schatz @lh3lh3 @Chai_Arkarachai @YihChii and many others, I feel grateful to participate in scientific work despite less than ideal situations!!

[DNAnexus, Inc. @dnanexus]

“DNAnexus raises $200M financing, with platform expansion in mind”. Read more at @GENbio https://t.co/c5eQFf1DwM
#DrugDiscovery #genomics #PrecisionMedicine

[DNAnexus, Inc. @dnanexus]

We are thrilled to announce a $200M financing round led by @blackstone to accelerate the global adoption of our technology & expand #PrecisionMedicine solutions worldwide. Read more.
https://t.co/C2UYtNRGg9

[Arkarachai Fungtammasan, PhD @Chai_Arkarachai]

@TerraBioApp Thanks @VdaGeraldine @TerraBioApp. I'm glad you find it interesting. Thanks to @GreeneScientist @seandavis12 @infoecho @jaclyn_taroni @localee_compact @datawheeler who shared their experience with the community.

[Fritz Sedlazeck @sedlazeck]

@dnanexus Join us to learn more about important @GenomeInABottle work to resolve medically relevant but hard to assess genes (e.g. SMN1). These #Genomics benchmark are essential for future #BioInformatics methods! Will be a fun event on March 3 (noon CT) @dnanexus @BCMFromtheLabs @BCM_HGSC

[NVIDIA Healthcare @NVIDIAHealth]

Tomorrow at 8am PST, join a webinar with @uk_biobank, @RegeneronDNA, NVIDIA, and @dnanexus to learn about an analysis pipeline used to quickly sequence and analyze 450,000 exomes using a #bioinformatics protocol comprising entirely open-source tools.

[Arkarachai Fungtammasan, PhD @Chai_Arkarachai]

We just published the “Ten Simple Rules for Large-scale Data Processing” with @GreeneScientist @seandavis12 @infoecho @localee_compact @datawheeler @jaclyn_taroni based on our experience. https://t.co/hG0MTgOGjd
#Bioinformatics #BigData #CloudComputing

[DNAnexus, Inc. @dnanexus]

Are you running the data or are you run over by petabytes of data? These ten simple rules will help you to tame large-scale datasets. Read more: https://t.co/UiIX5XmkUy
@Chai_Arkarachai #bioinformatics #genomics #BigData

[Nature Biotechnology @NatureBiotech]

@GenomeInABottle @BCM_HGSC @dnanexus @PacBio @DanaFarber @NCBI @ResearchCM @RocheSequencing @uwgenome @sedlazeck @NIST New benchmark report from NIST, Baylor College of Medicine and DNAnexus helps provide accurate identification of variants in challenging medically relevant genes #NBTintheNews https://t.co/itLdg6TX7D

[National Institute of Standards and Technology @NIST]

Explore 20,000 variants in the human genome, some linked to rare genetic disorders, that are spelled out in a new @NatureBiotech paper from NIST, @bcmhouston and @dnanexus: https://t.co/9zPqK8zfo2

[DNAnexus, Inc. @dnanexus]

New benchmark report from @NIST, @BCM_HGSC, @dnanexus published today in @NatureBiotech! Learn how accurate identification of variants in challenging medically-relevant genes may help advance R&D. https://t.co/193rss6GDC #genomics