S. Stephen Yi

Director of Bioinformatics and Faculty Member; Passionate about functional genomics, systems biology, gene regulation and cancer.

[S. Stephen Yi @StephenYiLab]

Excited to share our recent paper in Nature Methods: “eSIG-Net: an interaction language model that decodes the protein code of single mutations.”
https://t.co/xAWL7MFUfO

[S. Stephen Yi @StephenYiLab]

@DurenZhana @NatureBiotech Congrats on the exciting work!

[S. Stephen Yi @StephenYiLab]

Great honor to have breakfast with Senator Kay Bailey Hutchison @kaybaileyhutch, Drs. Brendan Lee (BCM), Michael Brown (UTSW), David Daniel (UTD), sharing honor with other winners @AaronBecker, Paola Passalacqua and Matt Sieber @sieber_lab

[S. Stephen Yi @StephenYiLab]

So honored to be selected as a ⁦winner of protege poster challenge
@TAMESTX @UTAustin, celebrating TAMEST's 20th anniversary (AI/ML theme), with brightest minds @theNASEM @theNASciences @theNAEng ⁦@theNAMedicine members in Texas! https://t.co/xY4ATe0r7z

[Kay Bailey Hutchison @kaybaileyhutch]

Breakfast this morning with ��@TAMESTX⁩ winners of poster contest , making complicated explanations better! Winners from ⁦@UTAustin⁩ ⁦@UTSouthwestern⁩ ⁦⁦@UHouston⁩ !

[S. Stephen Yi @StephenYiLab]

@TAMESTX https://t.co/TbyC8NVB2M

[TAMEST @TAMESTX]

TAMEST Mary Beth Maddox Committee Chair Ralph DeBerardinis, @UTSWNews, presents Nidhi Sahni, Ph.D., @MDAndersonNews, with the 2024 TAMEST Mary Beth Maddox Award. #TAMEST2024

[S. Stephen Yi @StephenYiLab]

Kudos to Dr. Sahni, my wife, for this amazing award @TAMESTX! Well-deserved for her significant contributions to cancer research!

https://t.co/e3L6kNwGlN

[Kay Bailey Hutchison @kaybaileyhutch]

Breakfast this morning with ⁦@TAMESTX⁩ winners of poster contest , making complicated explanations better! Winners from ⁦@UTAustin⁩ ⁦@UTSouthwestern⁩ ⁦⁦@UHouston⁩ !

[S. Stephen Yi @StephenYiLab]

Cancer scholars/researchers got together to brainstorm and inspire CPRIT & community about emerging & exciting opportunities in cancer research using computational/modeling/AI methods!

[S. Stephen Yi @StephenYiLab]

Thrilled & Inspired to co-chair first-ever Computational Oncology #CPRITSymposium with Tom Yankeelov @UTCompOnco, covering the Cancer Continuum(Prevention->Detection->Treatment) STRONG support from @CPRITTexas #LivestrongCancerInstitutes @OdenInstitute @UTAustin & @MDAndersonNews

[S. Stephen Yi @StephenYiLab]

Proud to work with a fantastic team 3A (Pink Panthers): @joshuagruber (UTSW), @fu_jingxin (Harvard/Broad), Sherry Zong, @tamzid999, Lucas Bartel, Sadik Yildiz! And many thanks to Komen folks @jourquin, Grace Nicholl, @e_jess, Aron Parekh!

[S. Stephen Yi @StephenYiLab]

Honored & excited to lead Team 3A @SusanGKomen
to a Winning Prize in the First ever #Hackathon to focus on #BigData challenges in breast cancer #BD4BC. Incredible experience! Special thanks to the great funders @LHBioinf_UTSW/@utswcancer in UT Southwestern, Dallas, TX!

[JJourquin @jourquin]

⁦@SusanGKomen⁩ ⁦@LHBioinf_UTSW⁩ #hackathon - team 3A presenting! #BD4BC

[S. Stephen Yi @StephenYiLab]

@RongFan8 @Nature @YaleBme @YaleSEAS @YaleMed @GoCasteloBranco @karolinskainst Amazing contribution to the field! Big congrats, Rong and team!!

[S. Stephen Yi @StephenYiLab]

@XihongLin @theNCI Congrats!

[S. Stephen Yi @StephenYiLab]

@salkinstitute @JoeEcker @UCSDHealthSci @UCIrvine @WUSTL @NIH @USBrainAlliance Congratulations! @JoeEcker Incredible news and look forward to the discoveries ahead!

[Research Corporation for Science Advancement @RCSA1]

Congratulations to Stephen Yi @StephenYiLab and Ruixuan Gao @Ruixuan3 @ChemistryatUIC @UIC_BioS @UICLAS @thisisUIC for “In Situ Protein Sequencing by Multiplexed Real-Time Single Molecule Imaging.”

[S. Stephen Yi @StephenYiLab]

We are happy to share the great news that @RCSA1, CZI @cziscience, the Cottrell Foundation & Walder Foundation just awarded us as one of 10 multidisciplinary teams, in a new Scialog initiative!!!

[Research Corporation for Science Advancement @RCSA1]

RCSA, @cziscience, the Frederick Gardner Cottrell Foundation & Walder Foundation have made #Scialog: Advancing BioImaging awards to 10 multidisciplinary teams of early career researchers working to develop the next generation of imaging technologies. https://t.co/0vpYJvWHBT

[Research Corporation for Science Advancement @RCSA1]

RCSA & @MooreFound announce awards of $1,320,000 to nine teams in the final year of #Scialog: Chemical Machinery of the Cell, an initiative launched in 2018 to advance fundamental understanding of chemical machinery and reactions in the intact cell. https://t.co/RbtHYlOVfQ

[Research Corporation for Science Advancement @RCSA1]

Congratulations to Jan-Hendrik Spille @LabSpille @thisisUIC @UICLAS and Stephen Yi @StephenYiLab for “Visualizing Inheritance through the Lens of Phase Separation.”

[S. Stephen Yi @StephenYiLab]

Check out our paper "e-MutPath: computational modeling reveals the functional landscape of genetic mutations rewiring interactome networks"- new computational tool to systematically assign functions to genetic mutations in networks!
https://t.co/Qa2jG14z9R

[Yi Xing @YiXing77]

Check out our new paper, "isoCirc catalogs full-length circular RNA isoforms in human transcriptomes". We report a nanopore long-read sequencing strategy and companion computational pipeline to characterize circular RNA isoforms of human genes. https://t.co/2hbNonAqDC