David Nicholson, PhD

Data Scientist at @DigitalSci | All tweets are from my perspective only.

[Milton Pividori @miltondp]

Very glad that our work with @GreeneScientist and others in integrating genetic studies with gene co-expression patterns is published in @NatureComms! Take a look at https://t.co/ePbcOjCjQG

[David Nicholson, PhD @dnicholson329]

Whoo final update! All is resolved! Looking forward to my flight with @JetBlue tonight.

[David Nicholson, PhD @dnicholson329]

Well @JetBlue just got confirmed my flight is at 8:51 pm now. With NO. explanation.. Feels really bad for the passengers that have connections. REALLY hope a better flight shows up…

[David Nicholson, PhD @dnicholson329]

So we doing ghost flights back to new york @JetBlue? Great to know this company cancels flights for no reason and then leaves passengers stranded with no means of getting back. I hope the @FAANews hears about this debacle. Where is the 3:31 am flight?

[David Nicholson, PhD @dnicholson329]

Alright awesome since i can’t get answers by direct messaging. Another passenger told me the updated flight is at 8:51 pm. 18+ hours i get to kill at @Gatwick_Airport . What’s going on? Would love answers….

[Ariel Hippen, PhD @ariel_hippen]

Interested in deconvolution of bulk RNA-seq data? Check out our new preprint, "Performance of computational algorithms to deconvolve heterogeneous bulk tumor tissue depends on experimental factors" https://t.co/0yofWihT9y 1/

[Nikaela W. Bryan, PhD @nikaelawbryan]

Lemme upgrade you!!

My design website got a huge makeover and we’re open just in time for the holidays!! Make sure to buy a gift for yourself or a loved one! I appreciate your support

https://t.co/04XwvTGVhr

#SmallBusinesses #holiday #SupportBlackBusiness

[David Nicholson, PhD @dnicholson329]

Congrats!!! This is well deserved! Watch out she is going to be doing great things.

[Van Truong @vantru0ng]

Words cannot express what being selected for the 2022 Microsoft Research PhD Fellowship means to me!!! 🏆😭

I want to thank my mentors who have written countless letters for me. Thank you for your advocacy & support @MarylynRitchie @EJohnWherry @gershbrain @lishenlc @VTIMSDPREP

[David Nicholson, PhD @dnicholson329]

@PATurnpikeAlert Yeah. Any word on re-route? Stuck in this as well.

[Samantha Klasfeld -- open to work @SJK314]

ITS OUT! MY FIRST PUBLISHED PEER REVIEWED PAPER! THANK YOU SO MUCH TO @Doris_Wagner_ AND @roule_thomas FOR HELPING MAKE THIS HAPPEN. Want to remove ChIP-seq artifacts from ChIP-seq data from a species without a published blacklist and without installing a new software? Check it!

[Kaylyn Clark @Kaylyn_Clark96]

Excited to announce that my first first-author publication is now available in print!!!

Polygenic Risk Scores in Alzheimer's Disease Genetics: Methodology, Applications, Inclusion, and Diversity https://t.co/1pEB6B2pBX

[David Nicholson, PhD @dnicholson329]

Unapologetically took some personal time to go to @NMAAHC. I mean… it was exactly what I needed to see. Learned some much starting from the 1400s up until now. Go if you can get the chance. #history #learnmyroots

[David Nicholson, PhD @dnicholson329]

Guess cat’s out the bag. Excited to be invited as a keynote speaker for ISCB Rocky 2022!! Hope to see y’all there in December! https://t.co/rkMYW6IJbr

[Taylor Reiter @ReiterTaylor]

🎉 New tutorial 🎉 Ever wanted to go from raw metagenome reads to a handy taxonomic table like the ones in phyloseq or speedyseq? Sourmash gather & sourmash tax get you there quickly and accurately 🏃‍♀️ 💯 https://t.co/2ySJP72it9

[David Nicholson, PhD @dnicholson329]

So the new synonym for being broke is stingy. Got it! #boomerlogic

[Yell in a War @jelenawoehr]

do they want us to get the fucking avocado toast or not

[David Nicholson, PhD @dnicholson329]

Thank you to everyone at @btcpgh for congratulating me on my successful defense. Your kind words mean a lot! Grace and Peace!!

[Taylor Reiter @ReiterTaylor]

New preprint! "Meta-analysis of metagenomes via machine learning and assembly graphs reveals strain switches in Crohn’s disease" In this paper, we do three things 🧵
https://t.co/EqPQUntPIL

[David Nicholson, PhD @dnicholson329]

Congrats Alex!!! Been more than a pleasure working along side you in the @GreeneLab. Looking forward to see what you accomplish next!!!

[Alexandra Lee (@[email protected]) @localee_compact]

Very proud and happy to share that I defended my thesis (April 22 2022) on developing computational methods to leverage big data to study microorganisms (https://t.co/hAfRbvbjIP)

[Jake Crawford @jjc2718]

1/ Our paper on predicting mutation status from pan-cancer -omics data is now published in @GenomeBiology : https://t.co/04IDV6kH5A . Short thread below: