Edina Erdős

PhD Student at University of Debrecen, Genomic Medicine and Bioinformatic Core Facility. Epigenetics. Genomics. Nuclear receptor. Breast cancer. Hobby: Futsal.

[Gene Regulation @generegulation]

Common DNA sequence variation influences 3-dimensional conformation of the human genome https://t.co/v5KGvv5IT6 DNA sequence variation influences loop strength, contact insulation, contact directionality and density of local cis contacts. #3Dgenome

[Edina Erdős @EdinaErds]

ChIPSummitDB https://t.co/jjYe1e2dva is out. A completely new approach in ChIP-seq analysis. 292 human cistromes and TF topology on TFBSs. https://t.co/MLCVNL40oc #ChIP #database #TF #transciptionfactor #bioinformatics

[Bernat Gel @bernatgel]

New #karyoploteR example! plotting #epigenetics data from @ENCODE_NIH BigWig files hosted at UCSC @GenomeBrowser without downloading them. Regulation of TP53 in K562 cell line.
Find the example and all code at
https://t.co/SfY4cCUdNm

#rstats #Genomics #dataviz

[Valirie Agbor @ValirieAgbor]

Hello #epitwitter #rstat

Winter is here! 😂

https://t.co/foI0um0VD8

[Dataquest @dataquestio]

Learn #rstats right in your browser with our new Data Analyst in R path.

It's hands-on learning using real-world data and modern tools like @rstudio, and it'll take you from zero R experience to veteran R coder.

Plus while it's in beta, it's free!

https://t.co/mamqtmk7MF

[The New York Times @nytimes]

Your laptop is probably dirty and gross. It might be time to clean it.

[Edina Erdős @EdinaErds]

@HalaszLaszlo Congrats! 👏🏻

[Sarah Knutie @SarahKnutie]

Writing a manuscript can be hard, overwhelming, and a lot of work.

One things that helps me is a structured checklist that I use for every manuscript.

Below is my process! Reply with your method too! 👇

Note: This process might not work for everyone... just suggestions ya'll!

[Ming "Tommy" Tang @tangming2005]

Rabix is a suite of open-source development tools for creating and running computational workflows. https://t.co/r2rrEpyaEm

[Pierre-Olivier Strale, PhD @Po_Strale]

Left: #UltimaThule @NASA . Right: Cell division. Astronomy or Biology? I still don't know what is the most fascinating....

[Lorena Barba @[email protected] @LorenaABarba]

The Handbook for Teaching and Learning with #Jupyter—first draft is out! #Jupyter4Edu https://t.co/Xa6YCA3rO7

[Edina Erdős @EdinaErds]

First Hungarian Software Carpentry Course with @dorabojcsuk @endre_sebestyen @fopsom @marpello1980 @balintblaszlo @ELIXIREurope #Rprogramming

[Edina Erdős @EdinaErds]

@dorabojcsuk Nice 👏🏻

[Michael Hoffman @michaelhoffman.bsky.social @michaelhoffman]

CJ says he used GREAT to identify function of non-genic regions but he wished he had something that would use 3D genome organization instead. It already exists and it's called BEHST! #biodata18 https://t.co/9SYX7aKFVM

[Laszlo Halasz @HalaszLaszlo]

The Nuclear Receptor PPARγ Controls Progressive Macrophage Polarization as a Ligand-Insensitive Epigenomic Ratchet of Transcriptional Memory https://t.co/ACtyet8b4J

[GIAVirginiaTech @GIAVirginiaTech]

The always useful tips from @LSEImpactBlog @PJDunleavy https://t.co/jkKEY7UHrA

[Nature Medicine @NatureMedicine]

Enhancer profiling of breast tumors reveals that chromatin regulatory elements contribute to the clonal fitness landscape, treatment resistance and phenotypic divergence: https://t.co/bxRul8rgcO #breastcancer

[Lauberth Lab @LauberthLab]

Latest work by @LauberthLab in @NatureSMB on the role of noncoding enhancer RNAs in regulating gene expression in cancer! https://t.co/CsQ9JCgQc9