PhD Student at University of Debrecen, Genomic Medicine and Bioinformatic Core Facility. Epigenetics. Genomics. Nuclear receptor. Breast cancer. Hobby: Futsal.
Common DNA sequence variation influences 3-dimensional conformation of the human genome https://t.co/v5KGvv5IT6 DNA sequence variation influences loop strength, contact insulation, contact directionality and density of local cis contacts. #3Dgenome
ChIPSummitDB https://t.co/jjYe1e2dva is out. A completely new approach in ChIP-seq analysis. 292 human cistromes and TF topology on TFBSs. https://t.co/MLCVNL40oc #ChIP#database#TF#transciptionfactor#bioinformatics
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Writing a manuscript can be hard, overwhelming, and a lot of work.
One things that helps me is a structured checklist that I use for every manuscript.
Below is my process! Reply with your method too! 👇
Note: This process might not work for everyone... just suggestions ya'll!
CJ says he used GREAT to identify function of non-genic regions but he wished he had something that would use 3D genome organization instead. It already exists and it's called BEHST! #biodata18 https://t.co/9SYX7aKFVM
The Nuclear Receptor PPARγ Controls Progressive Macrophage Polarization as a Ligand-Insensitive Epigenomic Ratchet of Transcriptional Memory https://t.co/ACtyet8b4J
Enhancer profiling of breast tumors reveals that chromatin regulatory elements contribute to the clonal fitness landscape, treatment resistance and phenotypic divergence: https://t.co/bxRul8rgcO #breastcancer